SMTL ID : 4qb3.1

Crystal structure of the first bromodomain of human BRD4 in complex with Olinone

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 0.94 Å

Oligo State

monomer

Ligands

1 x 30M: N-[4-(1-oxo-1,2,3,4-tetrahydro-5H-pyrido[4,3-b]indol-5-yl)butyl]acetamide(Non-covalent)

30M.1: 11 residues within 4Å: Chain A: W.40, P.41, F.42, V.46, L.53, C.95, N.99, D.103, D.104, I.105, M.108 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:W.40, A:P.41, A:F.42, A:L.53, A:I.105, A:I.105 Hydrogen bonds: A:N.99, A:D.103, A:D.103, A:I.105 Water bridges: A:C.95, A:D.104

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 5 residues within 4Å: Chain A: I.59, I.60, K.61, T.62, N.94 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:I.59, A:K.61, A:T.62, A:T.62, A:T.62

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gacias, M. et al., Selective chemical modulation of gene transcription favors oligodendrocyte lineage progression. Chem.Biol. (2014)

Release Date

2015-04-22

Peptides

Bromodomain-containing protein 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 4

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