SMTL ID : 5a85.1

N-TERMINAL BROMODOMAIN OF HUMAN BRD4 WITH 8-(3R,4R)-3-(cyclohexylmethoxy)piperidin-4-ylamino-3-methyl-1,2-dihydro-1,7- naphthyridin-2-one

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.72 Å

Oligo State

monomer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: Y.96, I.97, N.99, K.100, P.101 1 PLIP interactions: 1 interactions with chain A Water bridges: A:I.97

1 x 78J: (3R,4R)-3-(cyclohexylmethoxy)piperidin-4-yl]amino}-3-methyl-1,2-dihydro-1,7-naphthyridin-2-one(Non-covalent)

78J.2: 11 residues within 4Å: Chain A: W.40, P.41, F.42, V.46, L.51, L.53, C.95, N.99, D.103, I.105, M.108 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:W.40, A:F.42, A:V.46, A:L.51, A:I.105, A:I.105 Hydrogen bonds: A:N.99, A:N.99, A:N.99 Water bridges: A:K.100

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bamborough, P. et al., Structure-Based Optimization of Naphthyridones Into Potent Atad2 Bromodomain Inhibitors. J.Med.Chem. (2015)

Release Date

2015-08-12

Peptides

BROMODOMAIN-CONTAINING PROTEIN 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

BROMODOMAIN-CONTAINING PROTEIN 4

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