SMTL ID : 5igk.1

Crystal structure of the first bromodomain of human BRD4 in complex with bromosporine (BSP)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: I.59, I.60, K.61, T.62, N.94 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:I.59, A:K.61, A:T.62, A:T.62, A:N.94

1 x BMF: Bromosporine(Non-covalent)

BMF.2: 14 residues within 4Å: Chain A: W.40, P.41, F.42, Q.44, P.45, V.46, D.47, K.50, L.51, L.53, C.95, Y.98, N.99, I.105 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:W.40, A:F.42, A:V.46, A:L.51, A:L.51 Hydrogen bonds: A:D.47, A:K.50, A:K.50, A:N.99, A:N.99 Water bridges: A:Q.44, A:Q.44, A:D.47

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Picaud, S. et al., Promiscuous targeting of bromodomains by bromosporine identifies BET proteins as master regulators of primary transcription response in leukemia. Sci Adv (2016)

Release Date

2016-10-19

Peptides

Bromodomain-containing protein 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 4

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