SMTL ID : 5n32.1

cAMP-dependent Protein Kinase A from Cricetulus griseus in complex with fragment like molecule 4-chlorobenzyl carbamimidothioate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.83 Å

Oligo State

hetero-1-1-mer

Ligands

2 x 8K5: [azanyl-[(4-chlorophenyl)methylsulfanyl]methylidene]azanium(Non-covalent)

8K5.1: 16 residues within 4Å: Chain A: L.52, G.53, V.60, A.73, V.107, M.123, E.124, Y.125, V.126, E.130, E.173, N.174, L.176, T.186, D.187, F.330 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.52, A:V.60, A:F.330, A:F.330 Hydrogen bonds: A:E.173, A:N.174 Halogen bonds: A:E.124 8K5.2: 5 residues within 4Å: Chain A: L.85, K.86, E.89, T.200 Chain B: D.14 5 PLIP interactions: 3 interactions with chain A, 2 interactions with chain B Hydrophobic interactions: A:L.85, A:L.85 Hydrogen bonds: A:K.86, B:D.14, B:D.14

1 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.3: 11 residues within 4Å: Chain A: V.18, F.21, L.22, F.103, L.155, E.158, Y.159, K.295, W.305, I.306, Y.309 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:F.21, A:F.103, A:L.155, A:Y.309, A:Y.309 Hydrogen bonds: A:E.158 Water bridges: A:K.295

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Siefker, C. et al., A crystallographic fragment study with cAMP-dependent protein kinase A. To Be Published

Release Date

2018-02-28

Peptides

cAMP-dependent protein kinase catalytic subunit alpha: A
cAMP-dependent protein kinase inhibitor alpha-like protein: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

cAMP-dependent protein kinase catalytic subunit alpha

cAMP-dependent protein kinase inhibitor alpha-like protein

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