SMTL ID : 5n3k.1

cAMP-dependent Protein Kinase A from Cricetulus griseus in complex with fragment like molecule O-guanidino-L-homoserine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.33 Å

Oligo State

monomer

Ligands

1 x GGB: L-CANAVANINE(Non-covalent)

GGB.1: 10 residues within 4Å: Chain A: F.132, R.136, K.171, P.172, E.173, T.204, E.206, Y.207, E.233, P.239 4 PLIP interactions: 4 interactions with chain A Water bridges: A:E.206, A:E.206 Salt bridges: A:E.173, A:E.233

3 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.2: 5 residues within 4Å: Chain A: F.21, K.24, A.25, E.28, N.102 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:E.28 DMS.3: 6 residues within 4Å: Chain A: T.302, T.303, D.304, A.307, I.308, V.313 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.304 DMS.4: 3 residues within 4Å: Chain A: K.320, S.328, N.329 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.329

1 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.5: 11 residues within 4Å: Chain A: V.18, F.21, L.22, F.103, L.155, E.158, Y.159, K.295, W.305, I.306, Y.309 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:F.21, A:F.21, A:F.103, A:Y.309 Hydrogen bonds: A:E.158

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Siefker, C. et al., A crystallographic fragment study with cAMP-dependent protein kinase A. To Be Published

Release Date

2018-02-28

Peptides

cAMP-dependent protein kinase catalytic subunit alpha: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

cAMP-dependent protein kinase catalytic subunit alpha

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