SMTL ID : 5n3t.1

cAMP-dependent Protein Kinase A from Cricetulus griseus in complex with fragment like molecule 5-Chlorothiophene-2-sulfonamide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.21 Å

Oligo State

monomer

Ligands

2 x 8K2: 5-chloranylthiophene-2-sulfonamide(Non-covalent)

8K2.1: 8 residues within 4Å: Chain A: L.43, D.44, F.46, D.47, R.48, V.63, M.74, I.338 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:L.43, A:L.43 8K2.2: 12 residues within 4Å: Chain A: S.142, P.144, H.145, R.147, F.148, T.302, T.303, D.304, I.308, V.313, E.314, P.316 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:F.148, A:V.313 Hydrogen bonds: A:T.302, A:T.303 Water bridges: A:D.304

3 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.3: 5 residues within 4Å: Chain A: Y.232, Y.238, R.259, F.260, P.261 No protein-ligand interaction detected (PLIP) DMS.4: 5 residues within 4Å: Chain A: W.33, L.92, N.93, R.96, E.352 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.96 Salt bridges: A:E.352 DMS.5: 5 residues within 4Å: Chain A: N.39, T.40, A.41, Q.42, H.45 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.39

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Siefker, C. et al., A crystallographic fragment study with cAMP-dependent protein kinase A. To Be Published

Release Date

2018-02-28

Peptides

cAMP-dependent protein kinase catalytic subunit alpha: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

cAMP-dependent protein kinase catalytic subunit alpha

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