SMTL ID : 5o97.1

Crystal structure of human BRD4(1) bromodomain in complex with JRMBR4106

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.30 Å

Oligo State

monomer

Ligands

1 x 9OE: (5~{Z})-4-azanyl-5-[(3-methoxy-4-oxidanyl-phenyl)methylidene]-1,3-thiazol-2-one(Non-covalent)

9OE.1: 11 residues within 4Å: Chain A: W.40, P.41, F.42, Q.44, V.46, L.51, L.53, C.95, Y.98, N.99, I.105 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:P.41, A:F.42, A:V.46, A:I.105 Hydrogen bonds: A:P.41, A:Q.44, A:N.99 Water bridges: A:N.94

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 5 residues within 4Å: Chain A: I.59, I.60, K.61, T.62, N.94 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:I.59, A:K.61, A:T.62, A:T.62, A:T.62, A:N.94

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhu, J. et al., Crystal structure of human BRD4(1) bromodomain in complex with JRMBR4106. To Be Published

Release Date

2018-06-27

Peptides

Bromodomain-containing protein 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 4

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