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SMTL ID : 5t6r.1

Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3 Complex

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY 4.50 Å
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
86 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)
3 x K: POTASSIUM ION(Non-functional Binders)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Malyutin, A.G. et al., Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis. EMBO J. (2017)
Release Date
2017-02-08
Peptides
60S ribosomal protein L2-A: D
60S ribosomal protein L3: E
60S ribosomal protein L4-A: F
60S ribosomal protein L5: G
60S ribosomal protein L6-A: H
60S ribosomal protein L7-A: I
60S ribosomal protein L8-A: J
60S ribosomal protein L9-A: K
60S ribosomal protein L10: L
60S ribosomal protein L11-A: M
60S ribosomal protein L13-A: N
60S ribosomal protein L14-A: O
60S ribosomal protein L15-A: P
60S ribosomal protein L16-A: Q
60S ribosomal protein L17-A: R
60S ribosomal protein L18-A: S
60S ribosomal protein L19-A: T
60S ribosomal protein L20-A: U
60S ribosomal protein L21-A: V
60S ribosomal protein L22-A: W
60S ribosomal protein L23-A: X
60S ribosomal protein L24-A: Y
60S ribosomal protein L25: Z
60S ribosomal protein L26-A: 0
60S ribosomal protein L27-A: 1
60S ribosomal protein L28: 2
60S ribosomal protein L29: 3
60S ribosomal protein L30: 4
60S ribosomal protein L31-A: 5
60S ribosomal protein L32: 6
60S ribosomal protein L33-A: 7
60S ribosomal protein L34-A: 8
60S ribosomal protein L35-A: 9
60S ribosomal protein L36-A: a
60S ribosomal protein L37-A: b
60S ribosomal protein L38: c
60S ribosomal protein L39: d
Ubiquitin-60S ribosomal protein L40: e
60S ribosomal protein L42-A: f
60S ribosomal protein L43-A: g
Ribosomal Protein uL1: h
Maltose binding protein, 60S ribosomal export protein Nmd3 fusion: i
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
D
D
E
E
F
F
G
G
H
H
I
I
J
J
K
K
L
L
M
M
N
N
O
O
P
a
Q
b
R
c
S
d
T
e
U
f
V
g
W
h
X
i
Y
j
Z
k
0
l
1
m
2
n
3
o
4
p
5
q
6
r
7
s
8
t
9
u
a
v
b
w
c
x
d
y
e
z
f
Q
g
R
h
S
i
V

60S ribosomal protein L2-A

60S ribosomal protein L3

60S ribosomal protein L4-A

60S ribosomal protein L5

60S ribosomal protein L6-A

60S ribosomal protein L7-A

60S ribosomal protein L8-A

60S ribosomal protein L9-A

60S ribosomal protein L10

60S ribosomal protein L11-A

60S ribosomal protein L13-A

60S ribosomal protein L14-A

60S ribosomal protein L15-A

60S ribosomal protein L16-A

60S ribosomal protein L17-A

60S ribosomal protein L18-A

60S ribosomal protein L19-A

60S ribosomal protein L20-A

60S ribosomal protein L21-A

60S ribosomal protein L22-A

60S ribosomal protein L23-A

60S ribosomal protein L24-A

60S ribosomal protein L25

60S ribosomal protein L26-A

60S ribosomal protein L27-A

60S ribosomal protein L28

60S ribosomal protein L29

60S ribosomal protein L30

60S ribosomal protein L31-A

60S ribosomal protein L32

60S ribosomal protein L33-A

60S ribosomal protein L34-A

60S ribosomal protein L35-A

60S ribosomal protein L36-A

60S ribosomal protein L37-A

60S ribosomal protein L38

60S ribosomal protein L39

Ubiquitin-60S ribosomal protein L40

60S ribosomal protein L42-A

60S ribosomal protein L43-A

Ribosomal Protein uL1

Maltose binding protein, 60S ribosomal export protein Nmd3 fusion

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1t0k.1 | 1tnv.1 | 1tnv.2 | 1tnv.3 | 1tnv.4 | 1tnv.5 | 2ww9.1 | 2wwa.1 | 2wwb.1 | 3j16.1 | 3j6x.2 | 3j6x.3 | 3j6x.4 | 3j6x.5 | 3j6x.6 | 3j6x.7 | 3j6x.8 | 3j6x.9 | 3j6x.10 | 3j6x.11 | 3j6x.12 | 3j6x.13 | 3j6x.14 | 3j6x.15 | 3j6x.16 | 3j6x.17 | 3j6x.18 | 3j6x.19 | 3j6x.20 | 3j6x.21  more...