SMTL ID : 5z3g.1

Cryo-EM structure of a nucleolar pre-60S ribosome (Rpf1-TAP)

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
None
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Zhou, D. et al., Cryo-EM structure of an early precursor of large ribosomal subunit reveals a half-assembled intermediate. Protein Cell (2019)
Release Date
2018-04-11
Peptides
Ribosome biogenesis protein RLP7: D
Ribosome biogenesis protein 15: E
60S ribosomal protein L3: F
60S ribosomal protein L4-A: G
Proteasome-interacting protein CIC1: H
60S ribosomal protein L6-A: I
60S ribosomal protein L7-A: J
60S ribosomal protein L8-A: K
60S ribosomal protein L9-A: L
Nucleolar protein 7: M
Eukaryotic translation initiation factor 6: N
Ribosome production factor 1: O
60S ribosomal protein L13-A: P
60S ribosomal protein L14-A: Q
60S ribosomal protein L15-A: R
60S ribosomal protein L16-A: S
60S ribosomal protein L17-A: T
60S ribosomal protein L18-A: U
Ribosome biogenesis protein NSA1: V
60S ribosomal protein L20-A: W
Ribosomal RNA-processing protein 1: X
ATP-dependent RNA helicase HAS1: Y
Protein MAK16: Z
Ribosome biogenesis protein BRX1: 0
rRNA-processing protein EBP2: 1
60S ribosomal protein L26-A: 2
Unassigned: 3
60S ribosomal protein L32: 4
60S ribosomal protein L33-A: 5
60S ribosomal protein L35-A: 6
60S ribosomal protein L36-A: 7
60S ribosomal protein L37-A: 8
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
D
D
E
E
F
F
G
G
H
H
I
I
J
J
K
K
L
L
M
M
N
N
O
O
P
P
Q
Q
R
R
S
S
T
T
U
U
V
V
W
W
X
X
Y
Y
Z
Z
0
a
1
b
2
c
3
d
4
i
5
j
6
l
7
m
8
n

Ribosome biogenesis protein RLP7

Ribosome biogenesis protein 15

60S ribosomal protein L3

60S ribosomal protein L4-A

Proteasome-interacting protein CIC1

60S ribosomal protein L6-A

60S ribosomal protein L7-A

60S ribosomal protein L8-A

60S ribosomal protein L9-A

Nucleolar protein 7

Eukaryotic translation initiation factor 6

Ribosome production factor 1

60S ribosomal protein L13-A

60S ribosomal protein L14-A

60S ribosomal protein L15-A

60S ribosomal protein L16-A

60S ribosomal protein L17-A

60S ribosomal protein L18-A

Ribosome biogenesis protein NSA1

60S ribosomal protein L20-A

Ribosomal RNA-processing protein 1

ATP-dependent RNA helicase HAS1

Protein MAK16

Ribosome biogenesis protein BRX1

rRNA-processing protein EBP2

60S ribosomal protein L26-A

Unassigned

60S ribosomal protein L32

60S ribosomal protein L33-A

60S ribosomal protein L35-A

60S ribosomal protein L36-A

60S ribosomal protein L37-A

Related Entries With Identical Sequence

2ww9.1 | 2wwa.1 | 2wwb.1 | 3j16.1 | 3j2i.2 | 3j6x.3 | 3j6x.4 | 3j6x.6 | 3j6x.7 | 3j6x.8 | 3j6x.9 | 3j6x.12 | 3j6x.13 | 3j6x.14 | 3j6x.15 | 3j6x.16 | 3j6x.17 | 3j6x.19 | 3j6x.25 | 3j6x.31 | 3j6x.32 | 3j6x.34 | 3j6x.35 | 3j6x.36 | 3j6y.3 | 3j6y.4 | 3j6y.6 | 3j6y.7 | 3j6y.8 | 3j6y.9  more...