SMTL ID : 6em4.1

State B architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer

Ligands

None

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH

Citation

Kater, L. et al., Visualizing the Assembly Pathway of Nucleolar Pre-60S Ribosomes. Cell (2017)

Release Date

2017-12-27

Peptides

Ribosome production factor 1: A
60S ribosomal protein L7-A: B
Protein MAK16: C
Ribosomal RNA-processing protein 1: D
Ribosome biogenesis protein NSA1: E
Ribosome biogenesis protein BRX1: F
rRNA-processing protein EBP2: G
Ribosome biogenesis protein RLP24: H
Nucleolar protein 16: I
Eukaryotic translation initiation factor 6: J
60S ribosomal protein L3: K
60S ribosomal protein L4-A: L
60S ribosomal protein L32: M
60S ribosomal protein L6-A: N
60S ribosomal protein L33-A: O
60S ribosomal protein L8-A: P
60S ribosomal protein L35-A: Q
60S ribosomal protein L36-B: R
60S ribosomal protein L37-A: S
60S ribosomal protein L13-A: T
60S ribosomal protein L14-A: U
60S ribosomal protein L15-A: V
60S ribosomal protein L16-A: W
60S ribosomal protein L17-A: X
60S ribosomal protein L18-A: Y
60S ribosomal protein L20-A: Z
60S ribosomal protein L23-A: 0
60S ribosomal protein L26-A: 1
ATP-dependent RNA helicase HAS1: 4
Proteasome-interacting protein CIC1: 5
Pescadillo homolog: 6
Ribosome biogenesis protein 15: 7
Ribosome biogenesis protein RLP7: 8
Ribosome biogenesis protein ERB1: a

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
x

B
F

C
3

D
4

E
5

F
A

G
J

H
u

I
v

J
y

K
B

L
C

M
e

N
E

O
f

P
G

Q
h

R
i

S
j

T
L

U
M

V
N

W
O

X
P

Y
Q

Z
S

0
V

1
Y

4
D

5
K

6
n

7
o

8
t

a
H

Ribosome production factor 1

60S ribosomal protein L7-A

Protein MAK16

Ribosomal RNA-processing protein 1

Ribosome biogenesis protein NSA1

Ribosome biogenesis protein BRX1

rRNA-processing protein EBP2

Ribosome biogenesis protein RLP24

Nucleolar protein 16

Eukaryotic translation initiation factor 6

60S ribosomal protein L3

60S ribosomal protein L4-A

60S ribosomal protein L32

60S ribosomal protein L6-A

60S ribosomal protein L33-A

60S ribosomal protein L8-A

60S ribosomal protein L35-A

60S ribosomal protein L36-B

60S ribosomal protein L37-A

60S ribosomal protein L13-A

60S ribosomal protein L14-A

60S ribosomal protein L15-A

60S ribosomal protein L16-A

60S ribosomal protein L17-A

60S ribosomal protein L18-A

60S ribosomal protein L20-A

60S ribosomal protein L23-A

60S ribosomal protein L26-A

ATP-dependent RNA helicase HAS1

Proteasome-interacting protein CIC1

Pescadillo homolog

Ribosome biogenesis protein 15

Ribosome biogenesis protein RLP7

Ribosome biogenesis protein ERB1

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