SMTL ID : 7ug6.1

Cryo-EM structure of pre-60S ribosomal subunit, unmethylated G2922

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)
1 x MG: MAGNESIUM ION(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Yelland, J.N. et al., A single 2'-O-methylation of ribosomal RNA gates assembly of a functional ribosome. Nat.Struct.Mol.Biol. (2023)
Release Date
2022-12-21
Peptides
60S ribosomal protein L30: D
60S ribosomal protein L2-A: E
60S ribosomal protein L3: F
60S ribosomal protein L4-A: G
60S ribosomal protein L5: H
60S ribosomal protein L6-A: I
60S ribosomal protein L7-A: J
60S ribosomal protein L8-A: K
60S ribosomal protein L9-A: L
Bud site selection protein 20: M
60S ribosomal protein L11-A: N
60S ribosomal protein L13-A: O
60S ribosomal protein L14-A: P
60S ribosomal protein L15-A: Q
60S ribosomal protein L16-A: R
60S ribosomal protein L17-A: S
60S ribosomal protein L18-A: T
60S ribosomal protein L19-A: U
60S ribosomal protein L20-A: V
60S ribosomal protein L21-A: W
60S ribosomal protein L22-A: X
60S ribosomal protein L23-A: Y
Ribosome assembly factor MRT4: Z
60S ribosomal protein L25: 0
60S ribosomal protein L26-A: 1
60S ribosomal protein L27-A: 2
60S ribosomal protein L28: 3
Nucleolar GTP-binding protein 1: 4
Ribosome biogenesis protein ALB1: 5
60S ribosomal protein L31-A: 6
60S ribosomal protein L32: 7
60S ribosomal protein L33-A: 8
60S ribosomal protein L34-A: 9
60S ribosomal protein L35-A: a
60S ribosomal protein L36-A: b
60S ribosomal protein L37-A: c
60S ribosomal protein L38: d
60S ribosomal protein L39: e
Nucleolar GTP-binding protein 2: f
60S ribosomal protein L43-A: g
60S ribosomal protein L12-A: h
Ribosome biogenesis protein NSA2: i
Nuclear GTP-binding protein NUG1: j
Ribosome biogenesis protein RLP24: k
Ribosome biogenesis protein RPF2: l
Regulator of ribosome biosynthesis: m
Ribosome assembly protein 4: n
Eukaryotic translation initiation factor 6: o
UPF0642 protein YBL028C: p
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
D
7
E
A
F
B
G
C
H
D
I
E
J
F
K
G
L
H
M
I
N
J
O
L
P
M
Q
N
R
O
S
P
T
Q
U
R
V
S
W
T
X
U
Y
V
Z
W
0
X
1
Y
2
Z
3
a
4
b
5
c
6
d
7
e
8
f
9
g
a
h
b
i
c
j
d
k
e
l
f
m
g
p
h
q
i
r
j
s
k
u
l
v
m
w
n
x
o
y
p
z

60S ribosomal protein L30

60S ribosomal protein L2-A

60S ribosomal protein L3

60S ribosomal protein L4-A

60S ribosomal protein L5

60S ribosomal protein L6-A

60S ribosomal protein L7-A

60S ribosomal protein L8-A

60S ribosomal protein L9-A

Bud site selection protein 20

60S ribosomal protein L11-A

60S ribosomal protein L13-A

60S ribosomal protein L14-A

60S ribosomal protein L15-A

60S ribosomal protein L16-A

60S ribosomal protein L17-A

60S ribosomal protein L18-A

60S ribosomal protein L19-A

60S ribosomal protein L20-A

60S ribosomal protein L21-A

60S ribosomal protein L22-A

60S ribosomal protein L23-A

Ribosome assembly factor MRT4

60S ribosomal protein L25

60S ribosomal protein L26-A

60S ribosomal protein L27-A

60S ribosomal protein L28

Nucleolar GTP-binding protein 1

Ribosome biogenesis protein ALB1

60S ribosomal protein L31-A

60S ribosomal protein L32

60S ribosomal protein L33-A

60S ribosomal protein L34-A

60S ribosomal protein L35-A

60S ribosomal protein L36-A

60S ribosomal protein L37-A

60S ribosomal protein L38

60S ribosomal protein L39

Nucleolar GTP-binding protein 2

60S ribosomal protein L43-A

60S ribosomal protein L12-A

Ribosome biogenesis protein NSA2

Nuclear GTP-binding protein NUG1

Ribosome biogenesis protein RLP24

Ribosome biogenesis protein RPF2

Regulator of ribosome biosynthesis

Ribosome assembly protein 4

Eukaryotic translation initiation factor 6

UPF0642 protein YBL028C

Related Entries With Identical Sequence

1t0k.1 | 2ww9.1 | 2wwa.1 | 2wwb.1 | 3j16.1 | 3j2i.2 | 3j6x.2 | 3j6x.3 | 3j6x.4 | 3j6x.5 | 3j6x.6 | 3j6x.7 | 3j6x.8 | 3j6x.9 | 3j6x.11 | 3j6x.12 | 3j6x.13 | 3j6x.14 | 3j6x.15 | 3j6x.16 | 3j6x.17 | 3j6x.18 | 3j6x.19 | 3j6x.20 | 3j6x.21 | 3j6x.22 | 3j6x.24 | 3j6x.25 | 3j6x.26 | 3j6x.27  more...