SMTL ID : 6em3.1

State A architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer

Ligands

None

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH

Citation

Kater, L. et al., Visualizing the Assembly Pathway of Nucleolar Pre-60S Ribosomes. Cell (2017)

Release Date

2017-12-27

Peptides

Ribosome production factor 1: A
60S ribosomal protein L7-A: B
Protein MAK16: C
Ribosomal RNA-processing protein 1: D
Ribosome biogenesis protein NSA1: E
Ribosome biogenesis protein BRX1: F
rRNA-processing protein EBP2: G
Nucleolar protein 16: H
60S ribosomal protein L4-A: I
60S ribosomal protein L32: J
60S ribosomal protein L6-A: K
60S ribosomal protein L33-A: L
60S ribosomal protein L8-A: M
60S ribosomal protein L35-A: N
60S ribosomal protein L36-B: O
60S ribosomal protein L37-A: P
60S ribosomal protein L13-A: Q
60S ribosomal protein L14-A: R
60S ribosomal protein L15-A: S
60S ribosomal protein L16-A: T
60S ribosomal protein L17-A: U
60S ribosomal protein L18-A: V
60S ribosomal protein L20-A: W
60S ribosomal protein L26-A: X
ATP-dependent RNA helicase HAS1: 0
Proteasome-interacting protein CIC1: 1
Pescadillo homolog: 2
Ribosome biogenesis protein 15: 3
Ribosome biogenesis protein RLP7: 4
Ribosome biogenesis protein ERB1: 6

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
x

B
F

C
3

D
4

E
5

F
A

G
J

H
v

I
C

J
e

K
E

L
f

M
G

N
h

O
i

P
j

Q
L

R
M

S
N

T
O

U
P

V
Q

W
S

X
Y

0
D

1
K

2
n

3
o

4
t

6
B

Ribosome production factor 1

60S ribosomal protein L7-A

Protein MAK16

Ribosomal RNA-processing protein 1

Ribosome biogenesis protein NSA1

Ribosome biogenesis protein BRX1

rRNA-processing protein EBP2

Nucleolar protein 16

60S ribosomal protein L4-A

60S ribosomal protein L32

60S ribosomal protein L6-A

60S ribosomal protein L33-A

60S ribosomal protein L8-A

60S ribosomal protein L35-A

60S ribosomal protein L36-B

60S ribosomal protein L37-A

60S ribosomal protein L13-A

60S ribosomal protein L14-A

60S ribosomal protein L15-A

60S ribosomal protein L16-A

60S ribosomal protein L17-A

60S ribosomal protein L18-A

60S ribosomal protein L20-A

60S ribosomal protein L26-A

ATP-dependent RNA helicase HAS1

Proteasome-interacting protein CIC1

Pescadillo homolog

Ribosome biogenesis protein 15

Ribosome biogenesis protein RLP7

Ribosome biogenesis protein ERB1

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