- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 280 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)
- 6 x ZN: ZINC ION(Non-covalent)
ZN.281: 4 residues within 4Å:- Chain b: C.19, C.22, C.34, C.37
4 PLIP interactions:4 interactions with chain b- Metal complexes: b:C.19, b:C.22, b:C.34, b:C.37
ZN.282: 4 residues within 4Å:- Chain e: C.96, C.99, C.110, C.115
4 PLIP interactions:4 interactions with chain e- Metal complexes: e:C.96, e:C.99, e:C.110, e:C.115
ZN.283: 5 residues within 4Å:- Chain f: C.12, C.17, C.74, C.77, T.79
4 PLIP interactions:4 interactions with chain f- Metal complexes: f:C.12, f:C.17, f:C.74, f:C.77
ZN.284: 4 residues within 4Å:- Chain g: C.39, C.42, C.57, C.60
4 PLIP interactions:4 interactions with chain g- Metal complexes: g:C.39, g:C.42, g:C.57, g:C.60
ZN.285: 4 residues within 4Å:- Chain j: C.238, C.241, H.254, H.260
4 PLIP interactions:4 interactions with chain j- Metal complexes: j:C.238, j:C.241, j:H.254, j:H.260
ZN.286: 4 residues within 4Å:- Chain j: C.185, C.188, H.203, H.208
4 PLIP interactions:4 interactions with chain j- Metal complexes: j:C.185, j:C.188, j:H.203, j:H.208
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Greber, B.J. et al., Insertion of the Biogenesis Factor Rei1 Probes the Ribosomal Tunnel during 60S Maturation. Cell (2015)
- Release Date
- 2015-12-16
- Peptides
- 60S ribosomal protein L2-A: D
60S ribosomal protein L3: E
60S ribosomal protein L4-A: F
60S ribosomal protein L5: G
60S ribosomal protein L6-A: H
60S ribosomal protein L7-A: I
60S ribosomal protein L8-A: J
60S ribosomal protein L9-A: K
60S ribosomal protein L10: L
60S ribosomal protein L11-A: M
60S ribosomal protein L13-A: N
60S ribosomal protein L14-A: O
60S ribosomal protein L15-A: P
60S ribosomal protein L16-A: Q
60S ribosomal protein L17-A: R
60S ribosomal protein L18-A: S
60S ribosomal protein L19-A: T
60S ribosomal protein L20-A: U
60S ribosomal protein L21-A: V
60S ribosomal protein L22-A: W
60S ribosomal protein L23-A: X
60S ribosomal protein L24-A: Y
60S ribosomal protein L25: Z
60S ribosomal protein L26-A: 0
60S ribosomal protein L27-A: 1
60S ribosomal protein L28: 2
60S ribosomal protein L29: 3
60S ribosomal protein L30: 4
60S ribosomal protein L31-A: 5
60S ribosomal protein L32: 6
60S ribosomal protein L33-A: 7
60S ribosomal protein L34-A: 8
60S ribosomal protein L35-A: 9
60S ribosomal protein L36-A: a
60S ribosomal protein L37-A: b
60S ribosomal protein L38: c
60S ribosomal protein L39: d
Ubiquitin-60S ribosomal protein L40: e
60S ribosomal protein L42-A: f
60S ribosomal protein L43-A: g
60S acidic ribosomal protein P0: h
Probable metalloprotease ARX1: i
Cytoplasmic 60S subunit biogenesis factor REI1: j
ALB1: k - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:D
AE
BF
CG
DH
EI
FJ
GK
HL
IM
JN
LO
MP
NQ
OR
PS
QT
RU
SV
TW
UX
VY
WZ
X0
Y1
Z2
a3
b4
c5
d6
e7
f8
g9
ha
ib
jc
kd
le
mf
og
ph
qi
xj
yk
z
SMTL ID : 5apn.1
Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and N-terminally tagged Rei1
60S ribosomal protein L2-A
60S ribosomal protein L3
60S ribosomal protein L4-A
60S ribosomal protein L5
60S ribosomal protein L6-A
60S ribosomal protein L7-A
60S ribosomal protein L8-A
60S ribosomal protein L9-A
60S ribosomal protein L10
60S ribosomal protein L11-A
60S ribosomal protein L13-A
60S ribosomal protein L14-A
60S ribosomal protein L15-A
60S ribosomal protein L16-A
60S ribosomal protein L17-A
60S ribosomal protein L18-A
60S ribosomal protein L19-A
60S ribosomal protein L20-A
60S ribosomal protein L21-A
60S ribosomal protein L22-A
60S ribosomal protein L23-A
60S ribosomal protein L24-A
60S ribosomal protein L25
60S ribosomal protein L26-A
60S ribosomal protein L27-A
60S ribosomal protein L28
60S ribosomal protein L29
60S ribosomal protein L30
60S ribosomal protein L31-A
60S ribosomal protein L32
60S ribosomal protein L33-A
60S ribosomal protein L34-A
60S ribosomal protein L35-A
60S ribosomal protein L36-A
60S ribosomal protein L37-A
60S ribosomal protein L38
60S ribosomal protein L39
Ubiquitin-60S ribosomal protein L40
60S ribosomal protein L42-A
60S ribosomal protein L43-A
60S acidic ribosomal protein P0
Probable metalloprotease ARX1
Cytoplasmic 60S subunit biogenesis factor REI1
ALB1
Related Entries With Identical Sequence
1t0k.1 | 2ww9.1 | 2wwa.1 | 2wwb.1 | 3j16.1 | 3j6x.2 | 3j6x.3 | 3j6x.4 | 3j6x.5 | 3j6x.6 | 3j6x.7 | 3j6x.8 | 3j6x.9 | 3j6x.10 | 3j6x.11 | 3j6x.12 | 3j6x.13 | 3j6x.14 | 3j6x.15 | 3j6x.16 | 3j6x.17 | 3j6x.18 | 3j6x.19 | 3j6x.20 | 3j6x.21 | 3j6x.22 | 3j6x.23 | 3j6x.24 | 3j6x.25 | 3j6x.26 more...less...3j6x.27 | 3j6x.28 | 3j6x.29 | 3j6x.30 | 3j6x.31 | 3j6x.32 | 3j6x.33 | 3j6x.34 | 3j6x.35 | 3j6x.36 | 3j6x.37 | 3j6x.38 | 3j6x.39 | 3j6x.41 | 3j6x.42 | 3j6y.2 | 3j6y.3 | 3j6y.4 | 3j6y.5 | 3j6y.6 | 3j6y.7 | 3j6y.8 | 3j6y.9 | 3j6y.10 | 3j6y.11 | 3j6y.12 | 3j6y.13 | 3j6y.14 | 3j6y.15 | 3j6y.16 | 3j6y.17 | 3j6y.18 | 3j6y.19 | 3j6y.20 | 3j6y.21 | 3j6y.22 | 3j6y.23 | 3j6y.24 | 3j6y.25 | 3j6y.26 | 3j6y.27 | 3j6y.28 | 3j6y.29 | 3j6y.30 | 3j6y.31 | 3j6y.32 | 3j6y.33 | 3j6y.34 | 3j6y.35 | 3j6y.36 | 3j6y.37 | 3j6y.38 | 3j6y.39 | 3j6y.41 | 3j6y.42 | 3j77.2 | 3j77.3 | 3j77.4 | 3j77.5 | 3j77.6 | 3j77.7 | 3j77.8 | 3j77.9 | 3j77.10 | 3j77.11 | 3j77.13 | 3j77.14 | 3j77.15 | 3j77.16 | 3j77.17 | 3j77.18 | 3j77.19 | 3j77.20 | 3j77.21 | 3j77.22 | 3j77.23 | 3j77.24 | 3j77.25 | 3j77.26 | 3j77.27 | 3j77.28 | 3j77.29 | 3j77.30 | 3j77.31 | 3j77.32 | 3j77.33 | 3j77.34 | 3j77.35 | 3j77.36 | 3j77.37 | 3j77.38 | 3j77.39 | 3j77.40 | 3j77.42 | 3j77.43 | 3j77.44 | 3j78.2 | 3j78.3 | 3j78.4 | 3j78.5 | 3j78.6 | 3j78.7 | 3j78.8 | 3j78.9 | 3j78.10 | 3j78.11 | 3j78.13 | 3j78.14 | 3j78.15 | 3j78.16 | 3j78.17 | 3j78.18 | 3j78.19 | 3j78.20 | 3j78.21 | 3j78.22 | 3j78.23 | 3j78.24 | 3j78.25 | 3j78.26 | 3j78.27 | 3j78.28 | 3j78.29 | 3j78.30 | 3j78.31 | 3j78.32 | 3j78.33 | 3j78.34 | 3j78.35 | 3j78.36 | 3j78.37 | 3j78.38 | 3j78.39 | 3j78.40 | 3j78.42 | 3j78.43 | 3j78.44 | 3jbs.1 | 3jct.1 | 4ce4.1 | 4u3m.42 | 4u3m.52 | 4u3m.56 | 4u3m.117 | 4u3m.128 | 4u3m.132 | 4u3n.42 | 4u3n.52 | 4u3n.56 | 4u3n.117 | 4u3n.128 | 4u3n.132 | 4u3u.42 | 4u3u.52 | 4u3u.56 | 4u3u.117 | 4u3u.128 | 4u3u.132 | 4u4n.42 | 4u4n.52 | 4u4n.56 | 4u4n.117 | 4u4n.128 | 4u4n.132 | 4u4o.42 | 4u4o.52 | 4u4o.56 | 4u4o.117 | 4u4o.128 | 4u4o.132 | 4u4q.42 | 4u4q.52 | 4u4q.56 | 4u4q.117 | 4u4q.128 | 4u4q.132 | 4u4r.42 | 4u4r.52 | 4u4r.56 | 4u4r.117 | 4u4r.128 | 4u4r.132 | 4u4u.42 | 4u4u.52 | 4u4u.56 | 4u4u.117 | 4u4u.128 | 4u4u.132 | 4u4y.42 | 4u4y.52 | 4u4y.56 | 4u4y.117 | 4u4y.128 | 4u4y.132 | 4u4z.42 | 4u4z.52 | 4u4z.56 | 4u4z.117 | 4u4z.128 | 4u4z.132 | 4u50.42 | 4u50.52 | 4u50.56 | 4u50.117 | 4u50.127 | 4u50.131 | 4u51.42 | 4u51.52 | 4u51.56 | 4u51.117 | 4u51.128 | 4u51.132 | 4u52.42 | 4u52.52 | 4u52.56 | 4u52.117 | 4u52.128 | 4u52.132 | 4u53.42 | 4u53.52 | 4u53.56 | 4u53.117 | 4u53.128 | 4u53.132 | 4u55.42 | 4u55.52 | 4u55.56 | 4u55.117 | 4u55.127 | 4u55.131 | 4u56.42 | 4u56.52 | 4u56.56 | 4u56.117 | 4u56.127 | 4u56.131 | 4u6f.42 | 4u6f.52 | 4u6f.56 | 4u6f.117 | 4u6f.127 | 4u6f.131 | 4uq8.1 | 4v4b.1 | 4v6i.31 | 4v6i.33 | 4v6i.34 | 4v6i.35 | 4v6i.36 | 4v6i.37 | 4v6i.38 | 4v6i.40 | 4v6i.41 | 4v6i.42 | 4v6i.43 | 4v6i.44 | 4v6i.45 | 4v6i.46 | 4v6i.47 | 4v6i.48 | 4v6i.50 | 4v6i.51 | 4v6i.53 | 4v6i.54 | 4v6i.55 | 4v6i.56 | 4v6i.57 | 4v6i.58 | 4v6i.59 | 4v6i.61 | 4v6i.62 | 4v6i.63 | 4v6i.64 | 4v6i.65 | 4v6i.66 | 4v6i.69 | 4v6i.77 | 4v7f.1 | 4v7r.27 | 4v7r.28 | 4v7r.29 | 4v7r.31 | 4v7r.32 | 4v7r.33 | 4v7r.34 | 4v7r.35 | 4v7r.36 | 4v7r.37 | 4v7r.38 | 4v7r.39 | 4v7r.40 | 4v7r.41 | 4v7r.42 | 4v7r.43 | 4v7r.44 | 4v7r.45 | 4v7r.46 | 4v7r.47 | 4v7r.49 | 4v7r.50 | 4v7r.51 | 4v7r.52 | 4v7r.53 | 4v7r.54 | 4v7r.55 | 4v7r.56 | 4v7r.86 | 4v7r.87 | 4v7r.88 | 4v7r.90 | 4v7r.91 | 4v7r.92 | 4v7r.93 | 4v7r.94 | 4v7r.95 | 4v7r.98 | 4v7r.99 | 4v7r.100 | 4v7r.101 | 4v7r.102 | 4v7r.103 | 4v7r.104 | 4v7r.105 | 4v7r.106 | 4v7r.107 | 4v7r.108 | 4v7r.110 | 4v7r.111 | 4v7r.112 | 4v7r.113 | 4v7r.114 | 4v7r.115 | 4v7r.116 | 4v7r.117 | 4v88.35 | 4v88.36 | 4v88.37 | 4v88.38 | 4v88.39 | 4v88.40 | 4v88.41 | 4v88.42 | 4v88.43 | 4v88.44 | 4v88.45 | 4v88.46 | 4v88.47 | 4v88.48 | 4v88.49 | 4v88.50 | 4v88.51 | 4v88.52 | 4v88.53 | 4v88.54 | 4v88.55 | 4v88.56 | 4v88.57 | 4v88.58 | 4v88.59 | 4v88.60 | 4v88.61 | 4v88.62 | 4v88.63 | 4v88.64 | 4v88.65 | 4v88.66 | 4v88.67 | 4v88.68 | 4v88.69 | 4v88.70 | 4v88.71 | 4v88.72 | 4v88.74 | 4v88.75 | 4v88.110 | 4v88.111 | 4v88.112 | 4v88.113 | 4v88.114 | 4v88.115 | 4v88.116 | 4v88.117 | 4v88.118 | 4v88.119 | 4v88.121 | 4v88.122 | 4v88.123 | 4v88.124 | 4v88.125 | 4v88.126 | 4v88.127 | 4v88.128 | 4v88.129 | 4v88.130 | 4v88.131 | 4v88.132 | 4v88.133 | 4v88.134 | 4v88.135 | 4v88.136 | 4v88.137 | 4v88.138 | 4v88.139 | 4v88.140 | 4v88.141 | 4v88.142 | 4v88.143 | 4v88.144 | 4v88.145 | 4v88.146 | 4v88.147 | 4v88.148 | 4v88.150 | 4v88.151 | 4v8y.42 | 4v8y.53 | 4v8y.57 | 4v8y.73 | 4v8y.76 | 4v8z.42 | 4v8z.53 | 4v8z.57 | 4v8z.73 | 4v8z.76 | 4v91.1 | 5apo.1 | 5dat.42 | 5dat.52 | 5dat.56 | 5dat.117 | 5dat.128 | 5dat.132 | 5dc3.42 | 5dc3.52 | 5dc3.56 | 5dc3.117 | 5dc3.128 | 5dc3.132 | 5dge.42 | 5dge.52 | 5dge.56 | 5dge.66 | 5dge.117 | 5dge.128 | 5dge.132 | 5dge.142 | 5dgf.42 | 5dgf.52 | 5dgf.56 | 5dgf.117 | 5dgf.128 | 5dgf.132 | 5dgf.152 | 5dgv.42 | 5dgv.52 | 5dgv.56 | 5dgv.117 | 5dgv.128 | 5dgv.132 | 5fci.42 | 5fci.52 | 5fci.56 | 5fci.117 | 5fci.128 | 5fci.132 | 5fcj.42 | 5fcj.52 | 5fcj.56 | 5fcj.117 | 5fcj.128 | 5fcj.132 | 5gak.1 | 5h4p.1 | 5i4l.39 | 5i4l.42 | 5i4l.43 | 5i4l.52 | 5i4l.114 | 5i4l.117 | 5i4l.118 | 5i4l.128 | 5i4l.152 | 5j4z.16 | 5j7y.16 | 5j8k.16 | 5jcs.1 | 5juo.2 | 5juo.3 | 5juo.4 | 5juo.5 | 5juo.6 | 5juo.7 | 5juo.8 | 5juo.9 | 5juo.10 | 5juo.11 | 5juo.13