7z34.1 | SWISS-MODEL Template Library

SMTL ID : 7z34.1

Structure of pre-60S particle bound to DRG1(AFG2).

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-6-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer

Ligands

11 x AGS: PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER(Non-covalent)

1 x MG: MAGNESIUM ION(Non-covalent)

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Prattes, M. et al., Visualizing maturation factor extraction from the nascent ribosome by the AAA-ATPase Drg1. Nat.Struct.Mol.Biol. (2022)

Release Date

2022-09-21

Peptides

ATPase family gene 2 protein: Ahinqr
Probable metalloprotease ARX1: E
60S ribosomal protein L2-A: F
60S ribosomal protein L3: G
60S ribosomal protein L4-A: H
60S ribosomal protein L5: I
60S ribosomal protein L6-A: J
60S ribosomal protein L7-A: K
60S ribosomal protein L8-A: L
60S ribosomal protein L9-A: M
Bud site selection protein 20: N
60S ribosomal protein L11-A: O
60S ribosomal protein L28: P
60S ribosomal protein L13-A: Q
60S ribosomal protein L14-A: R
60S ribosomal protein L15-A: S
60S ribosomal protein L16-A: T
60S ribosomal protein L17-A: U
60S ribosomal protein L18-A: V
60S ribosomal protein L19-A: W
60S ribosomal protein L20-A: X
60S ribosomal protein L21-A: Y
60S ribosomal protein L22-A: Z
60S ribosomal protein L23-A: 0
Ribosome assembly factor MRT4: 1
60S ribosomal protein L25: 2
60S ribosomal protein L26-A: 3
60S ribosomal protein L27-A: 4
60S ribosomal protein L12-A: 5
Nucleolar GTP-binding protein 1: 6
60S ribosomal protein L30: 7
60S ribosomal protein L31-A: 8
60S ribosomal protein L32: 9
60S ribosomal protein L33-A: a
60S ribosomal protein L34-A: b
60S ribosomal protein L35-A: c
60S ribosomal protein L36-A: d
60S ribosomal protein L37-A: e
60S ribosomal protein L38: f
60S ribosomal protein L39: g
60S ribosomal protein L29: j
60S ribosomal protein L43-A: k
60S ribosomal protein L42-A: l
Ribosome biogenesis protein NSA2: m
Ribosome biogenesis protein RLP24: o
60S ribosomal export protein NMD3: p
Eukaryotic translation initiation factor 6: s
UPF0642 protein YBL028C: t
Unknown peptide: u
Unknown protein: v

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
Aa

h
m

i
n

n
t

q
w

r
x

E
4

F
A

G
B

H
C

I
D

J
E

K
F

L
G

M
H

N
I

O
J

P
K

Q
L

R
M

S
N

T
O

U
P

V
Q

W
R

X
S

Y
T

Z
U

0
V

1
W

2
X

3
Y

4
Z

5
a

6
b

7
c

8
d

9
e

a
f

b
g

c
h

d
i

e
j

f
k

g
l

j
o

k
p

l
q

m
r

o
u

p
v

s
y

t
z

u
0

v
oC

ATPase family gene 2 protein

Toggle Identical (qr)

Probable metalloprotease ARX1

60S ribosomal protein L2-A

60S ribosomal protein L3

60S ribosomal protein L4-A

60S ribosomal protein L5

60S ribosomal protein L6-A

60S ribosomal protein L7-A

60S ribosomal protein L8-A

60S ribosomal protein L9-A

Bud site selection protein 20

60S ribosomal protein L11-A

60S ribosomal protein L28

60S ribosomal protein L13-A

60S ribosomal protein L14-A

60S ribosomal protein L15-A

60S ribosomal protein L16-A

60S ribosomal protein L17-A

60S ribosomal protein L18-A

60S ribosomal protein L19-A

60S ribosomal protein L20-A

60S ribosomal protein L21-A

60S ribosomal protein L22-A

60S ribosomal protein L23-A

Ribosome assembly factor MRT4

60S ribosomal protein L25

60S ribosomal protein L26-A

60S ribosomal protein L27-A

60S ribosomal protein L12-A

Nucleolar GTP-binding protein 1

60S ribosomal protein L30

60S ribosomal protein L31-A

60S ribosomal protein L32

60S ribosomal protein L33-A

60S ribosomal protein L34-A

60S ribosomal protein L35-A

60S ribosomal protein L36-A

60S ribosomal protein L37-A

60S ribosomal protein L38

60S ribosomal protein L39

60S ribosomal protein L29

60S ribosomal protein L43-A

60S ribosomal protein L42-A

Ribosome biogenesis protein NSA2

Ribosome biogenesis protein RLP24

60S ribosomal export protein NMD3

Eukaryotic translation initiation factor 6

UPF0642 protein YBL028C

Unknown peptide

Unknown protein

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