SMTL ID : 8hfr.1

NPC-trapped pre-60S particle

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-3-1-1-3-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
237 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Li, Z. et al., Nuclear export of pre-60S particles through the nuclear pore complex. Nature (2023)
Release Date
2023-04-12
Peptides
60S ribosomal protein L35-A: A
60S ribosomal protein L34-A: B
60S ribosomal protein L29: C
60S ribosomal protein L2-A: D
60S ribosomal protein L23-A: E
60S ribosomal protein L16-A: F
60S ribosomal protein L33-A: G
60S ribosomal protein L6-A: H
Nucleolar GTP-binding protein 2: I
Nucleolar GTP-binding protein 1: J
Ribosome biogenesis protein RLP24: K
60S ribosomal protein L30: L
60S ribosomal protein L3: M
Eukaryotic translation initiation factor 6: N
60S ribosomal protein L22-A: O
60S ribosomal protein L31-A: P
60S ribosomal protein L32: Q
Shuttling pre-60S factor ECM1: R
Ribosome biogenesis protein ALB1: S
mRNA transport regulator MTR2: T0s
60S ribosomal protein L13-A: U
YEAST 60S ribosomal protein L12-A: V
mRNA export factor MEX67: W56
60S ribosomal protein L4-A: X
60S ribosomal protein L19-A: Y
60S ribosomal protein L14-A: Z
60S ribosomal protein L42-A: 1
Probable metalloprotease ARX1: 2
60S ribosomal protein L26-A: 3
60S ribosomal export protein NMD3: 4
60S ribosomal protein L43-A: 7
60S ribosomal protein L20-A: 8
60S ribosomal protein L36-A: 9
60S ribosomal protein L9-A: a
60S ribosomal protein L25: b
Ribosome biogenesis protein NSA2: c
Ribosome assembly factor MRT4: f
60S ribosomal protein L37-A: g
60S ribosomal protein L39: h
60S ribosomal protein L8-A: i
60S ribosomal protein L18-A: j
60S ribosomal protein L21-A: k
Translation machinery-associated protein 16: l
60S ribosomal protein L15-A: n
UPF0642 protein YBL028C: o
60S ribosomal protein L27-A: p
60S ribosomal protein L38: q
YEAST 60S ribosomal protein L1-A: r
60S ribosomal protein L7-A: t
60S ribosomal protein L17-A: u
60S ribosomal protein L28: v
Bud site selection protein 20: w
60S ribosomal protein L11-A: x
60S ribosomal protein L5: y
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
h1
B
g2
C
b3
D
B4
E
V5
F
O6
G
f7
H
F8
I
v9
J
rA
K
tB
L
cC
M
CD
N
yE
O
UF
P
dG
Q
eH
R
xI
S
qJ
T
DK
0
FR
s
Bt
U
LL
V
KM
W
AN
5
CW
6
EX
X
DO
Y
RP
Z
MQ
1
mS
2
pT
3
YU
4
vV
7
nY
8
SZ
9
ia
a
Ib
b
Xc
c
xd
f
Wg
g
jh
h
li
i
Hj
j
Qk
k
Tl
l
sm
n
No
o
zp
p
Zq
q
kr
r
As
t
Gu
u
Pv
v
aw
w
ox
x
Jy
y
Ez

60S ribosomal protein L35-A

60S ribosomal protein L34-A

60S ribosomal protein L29

60S ribosomal protein L2-A

60S ribosomal protein L23-A

60S ribosomal protein L16-A

60S ribosomal protein L33-A

60S ribosomal protein L6-A

Nucleolar GTP-binding protein 2

Nucleolar GTP-binding protein 1

Ribosome biogenesis protein RLP24

60S ribosomal protein L30

60S ribosomal protein L3

Eukaryotic translation initiation factor 6

60S ribosomal protein L22-A

60S ribosomal protein L31-A

60S ribosomal protein L32

Shuttling pre-60S factor ECM1

Ribosome biogenesis protein ALB1

mRNA transport regulator MTR2

Toggle Identical (T0s)

60S ribosomal protein L13-A

YEAST 60S ribosomal protein L12-A

mRNA export factor MEX67

60S ribosomal protein L4-A

60S ribosomal protein L19-A

60S ribosomal protein L14-A

60S ribosomal protein L42-A

Probable metalloprotease ARX1

60S ribosomal protein L26-A

60S ribosomal export protein NMD3

60S ribosomal protein L43-A

60S ribosomal protein L20-A

60S ribosomal protein L36-A

60S ribosomal protein L9-A

60S ribosomal protein L25

Ribosome biogenesis protein NSA2

Ribosome assembly factor MRT4

60S ribosomal protein L37-A

60S ribosomal protein L39

60S ribosomal protein L8-A

60S ribosomal protein L18-A

60S ribosomal protein L21-A

Translation machinery-associated protein 16

60S ribosomal protein L15-A

UPF0642 protein YBL028C

60S ribosomal protein L27-A

60S ribosomal protein L38

YEAST 60S ribosomal protein L1-A

60S ribosomal protein L7-A

60S ribosomal protein L17-A

60S ribosomal protein L28

Bud site selection protein 20

60S ribosomal protein L11-A

60S ribosomal protein L5

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