SMTL ID : 5yov.1

Crystal structure of BRD4-BD1 bound with hjp126

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.45 Å

Oligo State

monomer

Ligands

1 x 8XR: (3~{R})-4-cyclopentyl-~{N}-(2,4-dimethylphenyl)-1,3-dimethyl-2-oxidanylidene-3~{H}-quinoxaline-6-carboxamide(Non-covalent)

8XR.1: 11 residues within 4Å: Chain A: W.40, P.41, F.42, L.51, L.53, Y.56, C.95, Y.98, N.99, D.104, I.105 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:W.40, A:P.41, A:L.51, A:L.53, A:Y.56, A:Y.98, A:D.104, A:I.105, A:I.105, A:I.105 Hydrogen bonds: A:N.99 Water bridges: A:Q.44

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hu, J. et al., Structure-based optimization of a series of selective BET inhibitors containing aniline or indoline groups. Eur.J.Med.Chem. (2018)

Release Date

2018-11-07

Peptides

Bromodomain-containing protein 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 4

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