SMTL ID : 6g0d.1

BRD4 (BD1) in complex with APSC-derived ligands (e.g. LY294002)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.31 Å

Oligo State

monomer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: I.59, I.60, K.61, T.62, N.94 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:I.59, A:K.61, A:T.62, A:T.62

1 x LY2: 2-MORPHOLIN-4-YL-7-PHENYL-4H-CHROMEN-4-ONE(Non-covalent)

LY2.2: 10 residues within 4Å: Chain A: W.40, P.41, F.42, V.46, L.51, L.53, Y.56, Y.98, N.99, I.105 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:W.40, A:P.41, A:F.42, A:V.46, A:L.51, A:L.51, A:Y.98, A:I.105, A:I.105 Hydrogen bonds: A:N.99

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Humbeck, L. et al., Discovery of an Unexpected Similarity in Ligand Binding Between BRD4 and PPARgamma. Chemrxiv (2019)

Release Date

2020-01-08

Peptides

Bromodomain-containing protein 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 4

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