SMTL ID : 6xuz.1

CRYSTAL STRUCTURE OF BRD4-BD1 WITH COMPOUND 4

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.07 Å

Oligo State

monomer

Ligands

1 x O1W: 6-[1-[(2~{S})-1-methoxypropan-2-yl]-6-[(3~{S})-3-methylmorpholin-4-yl]imidazo[4,5-c]pyridin-2-yl]-3-methyl-~{N}-propan-2-yl-[1,2,4]triazolo[4,3-a]pyrazin-8-amine(Non-covalent)

O1W.1: 15 residues within 4Å: Chain A: W.40, P.41, F.42, Q.44, V.46, K.50, L.51, L.53, Y.56, C.95, Y.98, N.99, D.104, I.105, M.108 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:F.42, A:V.46, A:L.51, A:L.53, A:Y.98 Hydrogen bonds: A:N.99, A:N.99 Water bridges: A:Q.44, A:Y.56, A:Y.56 pi-Stacking: A:W.40

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Platzer, G. et al., PI by NMR: Probing CH-pi Interactions in Protein-Ligand Complexes by NMR Spectroscopy. Angew.Chem.Int.Ed.Engl. (2020)

Release Date

2020-07-08

Peptides

Bromodomain-containing protein 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 4

Related Entries With Identical Sequence