SMTL ID : 6yin.1

Crystal structure of the first bromodomain of BRD4 in complex with a benzo-diazepine ligand

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.53 Å

Oligo State

monomer

Ligands

1 x OS8: (4~{R})-~{N}-[3-(7-methoxy-3,4-dihydro-2~{H}-quinolin-1-yl)propyl]-4-methyl-2-oxidanylidene-1,3,4,5-tetrahydro-1,5-benzodiazepine-6-carboxamide(Non-covalent)

OS8.1: 12 residues within 4Å: Chain A: W.40, P.41, F.42, Q.44, V.46, K.50, L.51, L.53, Y.56, Y.98, N.99, I.105 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:F.42, A:K.50, A:L.53, A:L.53, A:Y.56 Hydrogen bonds: A:K.50, A:N.99, A:N.99 pi-Stacking: A:W.40

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Picaud, S. et al., Crystal structure of the first bromodomain of BRD4 in complex with a benzo-diazepine ligand. To Be Published

Release Date

2020-04-15

Peptides

Bromodomain-containing protein 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 4

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