SMTL ID : 6yqz.1

N-terminal domain of BRD4 with biphenyl-methyamino-dimethylpyridazinone

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.39 Å

Oligo State

monomer

Ligands

1 x P8W: 2,4-dimethyl-5-[(2-phenylphenyl)methylamino]pyridazin-3-one(Non-covalent)

P8W.1: 10 residues within 4Å: Chain A: W.40, P.41, F.42, V.46, L.51, L.53, Y.56, Y.98, N.99, I.105 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:W.40, A:W.40, A:P.41, A:P.41, A:L.51, A:L.51, A:L.53, A:Y.98, A:I.105, A:I.105 Hydrogen bonds: A:N.99

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 5 residues within 4Å: Chain A: I.59, I.60, K.61, T.62, N.94 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:I.59, A:K.61, A:T.62, A:T.62, A:T.62

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Clegg, M.A. et al., Application of Atypical Acetyl-lysine Methyl Mimetics in the Development of Selective Inhibitors of the Bromodomain-Containing Protein 7 (BRD7)/Bromodomain-Containing Protein 9 (BRD9) Bromodomains. J.Med.Chem. (2020)

Release Date

2021-03-24

Peptides

Bromodomain-containing protein 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 4

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