SMTL ID : 7bne.1

Notum Nicotine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 3 residues within 4Å: Chain A: Q.280, E.281, R.284 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.281, A:E.281, A:R.284, A:R.284 GOL.2: 5 residues within 4Å: Chain A: D.26, Y.63, K.117, E.122, Y.123 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.117

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 4 residues within 4Å: Chain A: R.167, E.170, V.225, E.227 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.227, A:E.227 Salt bridges: A:R.167 SO4.5: 4 residues within 4Å: Chain A: T.65, M.66, R.67, R.68 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.67, A:R.68 Water bridges: A:D.74 Salt bridges: A:R.68

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.4: 3 residues within 4Å: Chain A: N.19, S.21, V.22 No protein-ligand interaction detected (PLIP)

1 x NCT: (S)-3-(1-METHYLPYRROLIDIN-2-YL)PYRIDINE(Non-covalent)

NCT.6: 10 residues within 4Å: Chain A: W.51, Y.52, S.155, A.156, T.159, F.191, P.210, I.214, F.243, A.265 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:F.191, A:I.214, A:F.243, A:A.265 Hydrogen bonds: A:Y.52

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhao, Y. et al., Notum Inhibitor. To Be Published

Release Date

2022-03-02

Peptides

Palmitoleoyl-protein carboxylesterase NOTUM: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Palmitoleoyl-protein carboxylesterase NOTUM

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