SMTL ID : 8ym0.1

Single particle cryo-EM reconstruction of human serum albumin

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

5 x OCA: OCTANOIC ACID (CAPRYLIC ACID)

OCA.1: 3 residues within 4Å: Chain A: K.159, R.160, A.163 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:R.160, A:A.163 Salt bridges: A:K.159 OCA.2: 5 residues within 4Å: Chain A: N.18, K.159, P.282, L.283, L.284 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:L.283, A:L.284, A:L.284 Hydrogen bonds: A:L.283, A:L.284 Salt bridges: A:K.159 OCA.3: 10 residues within 4Å: Chain A: R.209, K.212, A.213, V.216, L.327, G.328, L.331, L.347, A.350, K.351 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:L.327, A:L.331, A:L.347, A:A.350, A:K.351 OCA.4: 11 residues within 4Å: Chain A: Y.150, K.199, L.238, H.242, R.257, L.260, A.261, I.264, S.287, I.290, A.291 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:Y.150, A:L.238, A:R.257, A:L.260, A:A.261, A:I.264, A:I.290, A:A.291 Salt bridges: A:K.195, A:K.199, A:H.242 OCA.5: 7 residues within 4Å: Chain A: N.391, F.403, L.407, R.410, Y.411, V.433, S.489 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:N.391, A:F.403, A:L.407, A:L.407, A:V.433 Hydrogen bonds: A:R.410, A:Y.411 Salt bridges: A:K.414

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dong, C.J. et al., Single particle cryo-EM reconstruction of recombinant human serum albumin. To Be Published

Release Date

2025-03-19

Peptides

Albumin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Albumin

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