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P0CG47 (UBB_HUMAN) Homo sapiens (Human)

Polyubiquitin-B UniProtKBInterProSTRINGInteractive Modelling

229 aa; Sequence (Fasta) ; 38 identical sequences

Available Structures

249 Experimental Structures

DescriptionPDB IDOligo-stateRangeLigands
Structure of K48-linked tri-ubiquitin in complex with cyclic peptide Heteromer
77-228
GOL;EPE;
Assess
Crystal Structure of Branched K11/K48-Linked Tri-Ubiquitin Heteromer
77-228
Assess
Linear specific OTU-type DUB SnOTU from the pathogen S. negenvensis in complex with linear di-ubiqu… Heteromer
F8L9T9;
77-228
Assess
Structure of USP21 in complex with linear diubiquitin-aldehyde Heteromer
Q9UK80;
77-228
ZN;SO4;
Assess
Solution-state NMR structural ensemble of human Tsg101 UEV in complex with K63-linked diubiquitin Heteromer
Q99816;
77-228
Assess
NMR Structure of Branched K11/K48-Linked Tri-Ubiquitin Heteromer
77-228
Assess
hRpn13:hRpn2:K48-diubiquitin Heteromer
Q16186; Q99460;
77-228
Assess
hRpn13:hRpn2:K48-diubiquitin Heteromer
Q16186; Q99460;
77-228
Assess
Crystal structure of cIAP1 RING domain bound to UbcH5B-Ub and a non-covalent Ub Heteromer
P62837; Q13490;
150-228
ZN;
Assess
Crystal structure of Western clawed frog MDM2 RING domain homodimer bound to UbcH5B-Ub Heteromer
Q28EY6; Q6P3Q9;
151-228
ZN;
Assess
SidC in complex with UbcH7~Ub Heteromer
P68036; Q6RCR4;
151-228
Assess
Model of human Anaphase-promoting complex/Cyclosome (APC/C-CDH1) with E2 UBE2S poised for polyubiqu… Heteromer
P30260; P34244; P60006; Q13042; Q16763; Q8NHZ8; Q96DE5; Q9BS18; Q9H1A4; Q9NYG5; Q9UJX2; Q9UJX3; Q9UJX4; Q9UJX5; Q9UJX6; Q9UM11; Q9UM13;
77-153
Assess
Lys27-linked di-ubiquitin Heteromer
P62987;
153-228
MG;
Assess
Lys6-linked di-ubiquitin Heteromer
P62987;
153-228
Assess
Lys48-linked K48C-diubiquitin Heteromer
153-228
Assess
Crystal structure of USP7 catalytic domain [V302K] mutant in complex with ubiquitin (malonate bound) Heteromer
Q93009;
153-228
MLA;GOL;
Assess
Crystal structure of USP7 catalytic domain [L299A] mutant in complex with ubiquitin Heteromer
Q93009;
153-228
GOL;
Assess
Branched Lys48- and Lys63-linked tri-ubiquitin (K48-K63-Ub3) in complex with synthetic nanobody NbS… Heteromer
153-228
MG;GOL;CL;NA;
Assess
Crystal structure of human MDM2-G443T RING domain homodimer bound to UbcH5B-Ub (Crystal form 1) Heteromer
P62837; Q00987;
153-228
CL;ZN;EDO;
Assess
Lys48-linked di-ubiquitin Heteromer
P62987;
153-228
Assess
TssM-Ub-PA complex - A USP-like DUB from B. pseudomallei (193-430) reacted with Ub-PA Heteromer
D7SFB8;
153-228
FLC;EDO;NA;
Assess
Crystal structure of USP7 catalytic domain [V302K] mutant in complex with ubiquitin Heteromer
Q93009;
153-228
Assess
Catalytic domain of Sst2 F403A mutant bound to ubiquitin Heteromer
Q9P371;
153-228
ZN;EDO;
Assess
Crystal structure of human ZUFSP/ZUP1 in complex with ubiquitin Heteromer
Q96AP4;
153-228
MLI;EDO;GOL;FMT;PEG;NH4;ACT;
Assess
Crystal Structure of a UbcH5b~Ub conjugate Heteromer
P62837;
153-228
GOL;
Assess
Structure of phospho-Parkin bound to phospho-ubiquitin Heteromer
O60260;
153-228
ZN;GOL;MPD;SO4;
Assess
crystal structure of p-Ub-S65-NH2 Heteromer
153-228
Assess
CRYSTAL STRUCTURE OF USP35 C450S IN COMPLEX WITH UBIQUITIN Heteromer
Q9P2H5;
153-228
SO4;EDO;ZN;
Assess
Structure of USP46-UbVME Heteromer
P62068;
153-228
ZN;
Assess
X-ray structure of MHV PLP2 (Cys1716Ser) catalytic mutant in complex with free ubiquitin Heteromer
P0C6X9;
153-228
GOL;FMT;ZN;
Assess
Branched Lys48- and Lys63-linked tri-ubiquitin (K48-K63-Ub3) in complex with matured synthetic nano… Heteromer
153-228
GOL;IPA;ZN;
Assess
Crystal structure of Lys27-linked di-ubiquitin in complex with its selective interacting protein UC… Heteromer
P15374;
153-228
Assess
The crystal structure of Papain-Like Protease of SARS CoV-2, C111S mutant, in complex with a Lys48-… Heteromer
P0DTD1;
77-152
ZN;CL;EDO;
Assess
Structure of UbE2D2:RNF165:Ub complex Heteromer
P62837; Q6ZSG1;
153-228
PO4;ZN;
Assess
Lys33-linked di-ubiquitin Heteromer
P62987;
153-228
Assess
Crystal structure of USP7 catalytic domain [H294E] mutant in complex with ubiquitin Heteromer
Q93009;
153-228
EPE;
Assess
Crystal Structure of mUCH37-hRPN13 CTD-hUb complex Heteromer
Q16186; Q9WUP7;
153-228
Assess
APC11-Ubv shows role of noncovalent RING-Ubiquitin interactions in processive multiubiquitination a… Heteromer
Q9NYG5;
76-151
ZN;
Assess
Structure of Deubiquitinase Heteromer
B9G207;
153-228
Assess
Crystal structure of the covalent complex between Tribolium castaneum deubiquitinase ZUP and Ubiqui… Heteromer
D6WWN1;
153-228
CIT;EDO;ZN;NA;
Assess
Crystal structure of human MDM2-G443T RING domain homodimer bound to UbcH5B-Ub (Crystal form 2) Heteromer
P62837; Q00987;
153-228
CL;ZN;EDO;
Assess
Crystal structure of Ube2K~Ubiquitin conjugate Heteromer
P61086;
153-228
GOL;
Assess
Crystal structure of Ub-conjugated Ube2K C92K&K97A mutant (isopeptide linkage), 2.1 A resolution Heteromer
P61086;
153-228
Assess
UCHL3 in complex with synthetic, K27-linked diubiquitin Heteromer
P0CG48; P15374;
153-228
K;BR;EDO;CL;
Assess
Structure of the stable UBE2D3-UbDha conjugate Heteromer
P61077;
153-228
GOL;
Assess
Crystal structure of ubiquitin-k6mimic Heteromer
153-228
Assess
TRIM23 RING domain in complex with UbcH5-Ub Heteromer
P36406; P62837;
153-228
ZN;
Assess
UCH-L5 in complex with ubiquitin-propargyl bound to the RPN13 DEUBAD domain Heteromer
Q16186; Q9Y5K5;
153-228
Assess
Crimean Congo Hemorrhagic Fever Virus OTU domain in complex with ubiquitin-propargyl. Heteromer
Q6TQR6;
153-228
Assess
Catalytic domain of Sst2 F403W mutant bound to ubiquitin Heteromer
Q9P371;
153-228
ZN;EDO;
Assess
REV1 UBM2 domain complex with ubiquitin Heteromer
Q9UBZ9;
153-228
NI;
Assess
TRIM25 RING domain in complex with Ubc13-Ub conjugate Heteromer
P61088; Q14258;
153-228
ZN;
Assess
E2 UBE2K covalently linked to donor Ub, acceptor di-Ub, and RING E3 primed for K48-linked Ub chain … Heteromer
P61086; Q9H0F5;
153-228
ZN;ME7;
Assess
Crystal structure of Ubiquitin specific protease 11 (USP11) in complex with a substrate mimetic Heteromer
P51784; Q1D4U9;
77-152
CD;CL;NO3;PO4;GOL;
Assess
Crystal structure of Ube2K and K48-linked di-ubiquitin complex Heteromer
P61086;
153-228
Assess
Disulfide between E3 HECT ligase Smurf2 and Ubiquitin G76C Heteromer
Q9HAU4;
153-228
GOL;
Assess
Skp1-F-box in complex with a ubiquitin variant Heteromer
P63208; Q969H0;
151-226
Assess
UbcH5a-Ub isopeptide conjugate Heteromer
P51668;
153-228
Assess
Ubiquitin Variant (UbV.Fl11.1) bound to a human Skp1-Fbl11 fragment complex. Heteromer
P63208; Q9Y2K7;
152-227
Assess
Structure of Pediculus humanus Parkin bound to phospho-ubiquitin Heteromer
E0VIU9;
153-228
ZN;SO4;
Assess
Structure of UbE2D2:RNF165:Ub complex Heteromer
P62837; Q6ZSG1;
153-228
ZN;
Assess
Crystal structure of Ub-conjugated Ube2K C92K&K97A mutant (isopeptide linkage), 2.7 A resolution Heteromer
P61086;
153-228
Assess
SARS CoV-2 PLpro in complex with ubiquitin propargylamide Heteromer
P0DTD1;
153-228
ZN;
Assess
Crystal structure of USP30 (C77A) in complex with Lys6-linked diubiquitin Heteromer
Q70CQ3;
153-228
ZN;
Assess
Structure of SdeA DUB Domain disulfide crosslinked with Ubiquitin Heteromer
Q5ZTK4;
153-228
Assess
Structure of A20 OTU domain bound to ubiquitin Heteromer
P21580;
153-228
Assess
Disulfide between ubiquitin G76C and the E3 HECT ligase Huwe1 Heteromer
Q7Z6Z7;
153-228
SO4;ZN;
Assess
Crystal Structure of Bovine DNMT1 RFTS domain in complex with H3K9me3 and Ubiquitin Heteromer
P84243; Q24K09;
153-228
FLC;ZN;
Assess
Structure of a Legionella effector with its substrate Heteromer
Q6RCR0;
153-228
Assess
Crystal structure of unbranched mixed tri-Ubiquitin chain containing K48 and K63 linkages. Heteromer
Q45TR8;
153-228
18×SO4;MG;
Assess
STRUCTURE OF UBIQUITYLATED-RPN10 FROM YEAST; Heteromer
P38886;
153-228
Assess
Structure of a Legionella effector with substrates Heteromer
Q6RCR0;
153-228
NAI;
Assess
Crystal Structure of PA-TM-RING E3 ligase RNF13 RING domain in complex with E2~Ub Heteromer
O43567; P62837;
153-228
ZN;
Assess
USP7CD-UBL45 in complex with Ubiquitin Heteromer
Q93009;
153-228
Assess
USP7CD-CTP in complex with Ubiquitin Heteromer
Q93009;
153-228
CA;
Assess
WDR48 (2-580):USP46~ubiquitin ternary complex Heteromer
P62068; Q8TAF3;
153-228
ZN;
Assess
Structure of a TRAF6-Ubc13~Ub complex Heteromer
P61088; Q6IWL4;
153-228
ZN;
Assess
Structure of the HOIP-RBR/UbcH5B~ubiquitin transfer complex Heteromer
P62837; Q96EP0;
153-228
ZN;
Assess
Structural basis of the flanking zinc-finger motifs crucial for the E3 ligase activity of the LNX1 … Heteromer
P61088; Q8TBB1;
153-228
ZN;
Assess
Crystal structure of USP30 in covalent complex with ubiquitin propargylamide (low resolution) Heteromer
Q70CQ3;
153-228
ZN;
Assess
SAGA DUB module Ubp8/Sgf11/Sus1/Sgf73 bound to ubiqitinated nucleosome Heteromer
P02281; P06897; P50102; P53165; P62799; P84233; Q03067; Q6WNK7;
153-228
16×ZN;
Assess
WDR48:USP46~ubiquitin ternary complex Heteromer
P62068; Q8TAF3;
153-228
ZN;
Assess
Structure of a TRAF6-Ubc13~Ub complex Heteromer
P61088; Q6IWL4;
153-228
ZN;K;
Assess
26S proteasome Rpt1-RK -Ubp6-UbVS complex in the si state Heteromer
O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33297; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P43593; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377;
153-228
ATP;MG;ADP;
Assess
Complex structure of MyUb (1080-1122) of human Myosin VI with K63-diUb Heteromer
Q9UM54;
153-228
Assess
UbcH7-Ub Complex with R0RBR Parkin and phosphoubiquitin Heteromer
O60260; P0CG48; P68036;
153-228
ZN;
Assess
Structural insight into BRCA1-BARD1 complex recruitment to damaged chromatin Heteromer
P02281; P06897; P62799; P84233; Q99728;
153-228
Assess
Structure of USP14-bound human 26S proteasome in substrate-inhibited state SC_USP14 Heteromer
A0A087X2I1; O00231; O00232; O00487; O14818; O43242; P17980; P20618; P25786; P25787; P25788; P25789; P28066; P28070; P28072; P28074; P35998; P43686; P48556; P49720; P49721; P51665; P54578; P55036; P60896; P60900; P62191; P62195; Q13200; Q15008; Q99436; Q99460; Q9UNM6;
153-228
ATP;ADP;ZN;
Assess
Structure of USP14-bound human 26S proteasome in state EA2.0_UBL Heteromer
A0A087X2I1; O00231; O00232; O00487; O14818; O43242; P17980; P20618; P25786; P25787; P25788; P25789; P28066; P28070; P28072; P28074; P35998; P43686; P48556; P49720; P49721; P51665; P54578; P55036; P60896; P60900; P62191; P62195; Q13200; Q15008; Q99436; Q99460; Q9UNM6;
153-228
ATP;MG;ADP;ZN;
Assess
Structure of USP14-bound human 26S proteasome in substrate-engaged state ED2.0_USP14 Heteromer
A0A087X2I1; O00231; O00232; O00487; O14818; O43242; P17980; P20618; P25786; P25787; P25788; P25789; P28066; P28070; P28072; P28074; P35998; P43686; P48556; P49720; P49721; P51665; P54578; P55036; P60896; P60900; P62191; P62195; Q13200; Q15008; Q99436; Q99460; Q9UNM6;
153-228
ATP;ADP;ZN;
Assess
Cryo-EM structures and dynamics of substrate-engaged human 26S proteasome Heteromer
O00231; O00232; O00487; O14818; O43242; P17980; P20618; P25786; P25787; P25788; P25789; P28066; P28070; P28072; P28074; P35998; P43686; P48556; P49720; P49721; P51665; P55036; P60896; P60900; P62191; P62195; P62333; Q13200; Q15008; Q99436; Q99460; Q9UNM6;
153-228
ZN;ATP;MG;ADP;
Assess
Solution Structure of UBM2 of murine Polymerase iota in Complex with Ubiquitin Heteromer
Q6R3M4;
153-228
Assess
Structure of USP14-bound human 26S proteasome in substrate-engaged state ED2.1_USP14 Heteromer
A0A087X2I1; O00231; O00232; O00487; O14818; O43242; P17980; P20618; P25786; P25787; P25788; P25789; P28066; P28070; P28072; P28074; P35998; P43686; P48556; P49720; P49721; P51665; P54578; P55036; P60896; P60900; P62191; P62195; Q13200; Q15008; Q99436; Q99460; Q9UNM6;
153-228
ATP;MG;ADP;ZN;
Assess
Structure of USP14-bound human 26S proteasome in state EA2.1_UBL Heteromer
A0A087X2I1; O00231; O00232; O00487; O14818; O43242; P17980; P20618; P25786; P25787; P25788; P25789; P28066; P28070; P28072; P28074; P35998; P43686; P48556; P49720; P49721; P51665; P54578; P55036; P60896; P60900; P62191; P62195; Q13200; Q15008; Q99436; Q99460; Q9UNM6;
153-228
ATP;MG;ADP;ZN;
Assess
Solution NMR structure of human RAD18 (198-240) in complex with ubiquitin Heteromer
Q9NS91;
153-228
ZN;
Assess
Solution Structure of UBM1 of murine Polymerase iota in Complex with Ubiquitin Heteromer
Q6R3M4;
153-228
Assess
Cryo-EM structure of the human nucleosome core particle ubiquitylated at histone H2A Lys13 and Lys1… Heteromer
P04908; P06899; P62805; P68431; Q99728;
153-228
Assess
Structure of USP14-bound human 26S proteasome in substrate-engaged state ED4_USP14 Heteromer
A0A087X2I1; O00231; O00232; O00487; O14818; O43242; P17980; P20618; P25786; P25787; P25788; P25789; P28066; P28070; P28072; P28074; P35998; P43686; P48556; P49720; P49721; P51665; P54578; P55036; P60896; P60900; P62191; P62195; Q13200; Q15008; Q99436; Q99460; Q9UNM6;
153-228
ADP;ATP;ZN;
Assess
Cryo-EM structures and dynamics of substrate-engaged human 26S proteasome Heteromer
O00231; O00232; O00487; O14818; O43242; P17980; P20618; P25786; P25787; P25788; P25789; P28066; P28070; P28072; P28074; P35998; P43686; P48556; P49720; P49721; P51665; P55036; P60896; P60900; P62191; P62195; P62333; Q13200; Q15008; Q99436; Q99460; Q9UNM6;
153-228
ZN;ATP;MG;ADP;
Assess
Structure of the complex of ubiquitin and the UBA domain from DNA-damage-inducible 1 protein (Ddi1) Heteromer
P40087;
153-228
Assess
Structure of USP14-bound human 26S proteasome in substrate-engaged state ED5_USP14 Heteromer
A0A087X2I1; O00231; O00232; O00487; O14818; O43242; P17980; P20618; P25786; P25787; P25788; P25789; P28066; P28070; P28072; P28074; P35998; P43686; P48556; P49720; P49721; P51665; P54578; P55036; P60896; P60900; P62191; P62195; Q13200; Q15008; Q99436; Q99460; Q9UNM6;
153-228
ATP;ADP;ZN;
Assess
Structure of USP14-bound human 26S proteasome in substrate-engaged state ED0_USP14 Heteromer
A0A087X2I1; O00231; O00232; O00487; O14818; O43242; P17980; P20618; P25786; P25787; P25788; P25789; P28066; P28070; P28072; P28074; P35998; P43686; P48556; P49720; P49721; P51665; P54578; P55036; P60896; P60900; P62191; P62195; Q13200; Q15008; Q99436; Q99460; Q9UNM6;
153-228
ATP;ADP;ZN;
Assess
cryo-EM structure of DOT1L bound to H2B ubiquitinated nucleosome Heteromer
P02281; P62799; P84233; Q6AZJ8; Q8TEK3;
153-228
SAM;
Assess
Structural basis of COMPASS eCM recognition of the H2Bub nucleosome Heteromer
P02281; P62799; P84233; Q6AZJ8; Q6CIT4; Q6CLY5; Q6CPN6; Q6CRQ4; Q6CTQ1; Q6CXF3; Q92133;
153-228
ZN;SAM;
Assess
Cryo-EM structure of PRC1 bound to H2AK119-UbcH5b-Ub nucleosome Heteromer
O60814; P04908; P35226; P62805; P62837; P68431; Q99496;
153-228
ZN;
Assess
Solution NMR structure of histone H2A-H2B mono-ubiquitylated at H2A Lys15 in complex with RNF169 (6… Heteromer
P04908; P06899; Q8NCN4;
153-228
Assess
Protein complex between phosphorylated ubiquitin and Ubqln2 UBA Heteromer
Q9UHD9;
153-228
Assess
Cryo-EM structures and dynamics of substrate-engaged human 26S proteasome Heteromer
O00231; O00232; O00487; O14818; O43242; P17980; P20618; P25786; P25787; P25788; P25789; P28066; P28070; P28072; P28074; P35998; P43686; P48556; P49720; P49721; P51665; P55036; P60896; P60900; P62191; P62195; P62333; Q13200; Q15008; Q99436; Q99460; Q9UNM6;
153-228
ZN;ATP;MG;ADP;
Assess
Cryo-EM structures and dynamics of substrate-engaged human 26S proteasome Heteromer
O00231; O00232; O00487; O14818; O43242; P17980; P20618; P25786; P25787; P25788; P25789; P28066; P28070; P28072; P28074; P35998; P43686; P48556; P49720; P49721; P51665; P55036; P60896; P60900; P62191; P62195; P62333; Q13200; Q15008; Q99436; Q99460; Q9UNM6;
153-228
ZN;ADP;ATP;MG;
Assess
The structure of the complex between Rpn13 and K48-diUb Heteromer
Q16186;
153-228
Assess
Structure of USP14-bound human 26S proteasome in substrate-inhibited state SD4_USP14 Heteromer
A0A087X2I1; O00231; O00232; O00487; O14818; O43242; P17980; P20618; P25786; P25787; P25788; P25789; P28066; P28070; P28072; P28074; P35998; P43686; P48556; P49720; P49721; P51665; P54578; P55036; P60896; P60900; P62191; P62195; Q13200; Q15008; Q99436; Q99460; Q9UNM6;
153-228
ADP;ATP;ZN;
Assess
Structure of USP14-bound human 26S proteasome in substrate-inhibited state SD5_USP14 Heteromer
A0A087X2I1; O00231; O00232; O00487; O14818; O43242; P17980; P20618; P25786; P25787; P25788; P25789; P28066; P28070; P28072; P28074; P35998; P43686; P48556; P49720; P49721; P51665; P54578; P55036; P60896; P60900; P62191; P62195; Q13200; Q15008; Q99436; Q99460; Q9UNM6;
153-228
ATP;ADP;ZN;
Assess
Lanthanoid tagging via an unnatural amino acid for protein structure characterization Heteromer
P54725;
153-228
TB;
Assess
Solution NMR structure of human Rev1 (932-1039) in complex with ubiquitin Heteromer
Q9UBZ9;
153-228
Assess
Dot1L bound to the H2BK120 Ubiquitinated nucleosome Heteromer
P02281; P06897; P62799; P84233; Q8TEK3;
153-228
SAH;
Assess
Cryo-EM structure of Dot1L and H2BK34ub-H3K79Nle nucleosome 2:1 complex Heteromer
O60814; P04908; P62805; Q71DI3; Q8TEK3;
153-228
SAM;
Assess
26S proteasome WT-Ubp6-UbVS complex in the si state (ATPases, Rpn1, Ubp6, and UbVS) Heteromer
P33297; P33298; P33299; P38764; P40327; P43593; P53549; Q01939;
153-228
ATP;MG;ADP;
Assess
Solution Structure of the human Polymerase iota UBM1-Ubiquitin Complex Heteromer
Q9UNA4;
153-228
Assess
Structure of USP14-bound human 26S proteasome in substrate-inhibited state SB_USP14 Heteromer
A0A087X2I1; O00231; O00232; O00487; O14818; O43242; P17980; P20618; P25786; P25787; P25788; P25789; P28066; P28070; P28072; P28074; P35998; P43686; P48556; P49720; P49721; P51665; P54578; P55036; P60896; P60900; P62191; P62195; Q13200; Q15008; Q99436; Q99460; Q9UNM6;
153-228
ATP;ADP;ZN;
Assess
Structure of USP14-bound human 26S proteasome in substrate-engaged state ED1_USP14 Heteromer
A0A087X2I1; O00231; O00232; O00487; O14818; O43242; P17980; P20618; P25786; P25787; P25788; P25789; P28066; P28070; P28072; P28074; P35998; P43686; P48556; P49720; P49721; P51665; P54578; P55036; P60896; P60900; P62191; P62195; Q13200; Q15008; Q99436; Q99460; Q9UNM6;
153-228
ATP;ADP;ZN;
Assess
Cryo-EM structure of Dot1L and H2BK34ub-H3K79Nle nucleosome 1:1 complex Heteromer
O60814; P04908; P62805; Q71DI3; Q8TEK3;
153-228
SAM;
Assess
Cryo-EM structure of BAP1-ASXL1 bound to chromatosome Heteromer
P10412; P20671; P62805; P68431; Q16778; Q8IXJ9; Q92560;
153-228
Assess
Structure of the chromatin remodelling enzyme Chd1 bound to a ubiquitinylated nucleosome Heteromer
P02302; P06897; P32657; P62799; Q28D68; S4RAZ3;
153-228
BEF;ADP;
Assess
Structure of the human 26S proteasome bound to USP14-UbAl Heteromer
O00231; O00232; O00487; O14818; O43242; P17980; P20618; P25786; P25787; P25788; P25789; P28066; P28070; P28072; P28074; P35998; P43686; P48556; P49720; P49721; P51665; P54578; P55036; P60896; P60900; P62191; P62195; P62333; Q13200; Q15008; Q99436; Q99460; Q9UNM6;
153-228
ADP;
Assess
Structural model of 53BP1 bound to a ubiquitylated and methylated nucleosome, at 4.5 A resolution Heteromer
P0C0S8; P62799; P62807; P84233; Q12888;
153-228
Assess
Lys63-linked di-ubiquitin Heteromer
P62987;
153-227
Assess
BIRC4 RING in complex with dimeric ubiquitin variant Heteromer
P98170;
152-226
ZN;EDO;
Assess
Structure of Chlamydia trachomatis effector protein Cdu1 bound to ubiquitin Heteromer
B0B9A0;
153-227
CL;AYE;
Assess
Structure of the catalytic domain of USP28 (insertion deleted) bound to Ubiquitin-PA Heteromer
Q96RU2;
153-227
EDO;
Assess
Crystal structure of the covalent complex between deubiquitinase ZUFSP (ZUP1) and Ubiquitin-PA Heteromer
Q96AP4;
153-227
AYE;GOL;MLI;
Assess
Structure of OtDUB DUB Domain disulfide crosslinked with Ubiquitin Heteromer
A0A2U3QWA1;
153-227
Assess
Structure of Chlamydia trachomatis effector protein ChlaDUB1 bound to ubiquitin Heteromer
B0B9A0;
153-227
GOL;SO4;AYE;
Assess
Structure of USP36 in complex with Ubiquitin-PA Heteromer
Q9P275;
153-227
ZN;AYE;NA;
Assess
Structure of RNF165 in complex with a UbcH5b~Ub conjugate Heteromer
P62837; Q6ZSG1;
153-227
GOL;SCN;ZN;
Assess
Structure of Cezanne/OTUD7B OTU domain bound to ubiquitin Heteromer
Q6GQQ9;
153-227
GOL;
Assess
Crystal structure of Legionella pneumophila macrodomain MavL in complex with ubiquitin vinyl methyl… Heteromer
Q5ZSJ1;
153-227
1PE;GVE;
Assess
Structure of MDM2-MDMX-UbcH5B-ubiquitin complex Heteromer
O15151; P62837; Q00987;
154-228
ZN;SO4;
Assess
Crystal structure of p-DiUb-S65-COOH Heteromer
153-227
Assess
Crystal structure of Legionella pneumophila macrodomain MavL in complex with ubiquitin vinyl methyl… Heteromer
Q5ZSJ1;
153-227
FLC;GVE;EDO;
Assess
Conjugate of the HECT domain of HUWE1 with ubiquitin Heteromer
Q5H924;
153-227
PO4;AYE;
Assess
Human Josephin-2 in complex with ubiquitin Heteromer
Q8TAC2;
153-227
NEH;
Assess
Crystal structure of USP30 in covalent complex with ubiquitin propargylamide (high resolution) Heteromer
Q70CQ3;
153-227
ZN;AYE;
Assess
Crystal structure of a OTU deubiquitinase in complex with Ub-PA Heteromer
Q5ZSI8;
153-227
AYE;
Assess
K6-specific affimer bound to K6 diUb Heteromer
153-227
GOL;
Assess
Crystal Structure of ChlaDUB2 DUB domain Heteromer
B0B999;
153-227
Assess
S65DParkin and pUB complex Heteromer
O60260;
153-227
PEG;CL;ZN;
Assess
Crystal structure of a bacterial OTU DUB with Ub-PA Heteromer
Q5ZTB4;
153-227
AYE;
Assess
Structure of the SdeA DUB Domain Heteromer
Q6RCR0;
153-227
SO4;GVE;
Assess
WT-Parkin and pUB complex Heteromer
O60260;
153-227
ZN;CL;TMO;
Assess
Structure of the Hazara virus OTU bound to ubiquitin Heteromer
A6XA53;
153-227
CA;AYE;GOL;
Assess
Structure of USP12-UB-PRG/UAF1 Heteromer
O75317; Q8TAF3;
153-227
AYE;ZN;GOL;
Assess
Structure of Cezanne/OTUD7B OTU domain bound to Lys11-linked diubiquitin Heteromer
Q6GQQ9;
153-227
PO4;GOL;
Assess
Structure of SARS PLpro bound to a Lys48-linked di-ubiquitin activity based probe Heteromer
P0C6X7; P0CG48;
153-227
ACT;NI;
Assess
PRRSV-1 PLP2 domain bound to ubiquitin Heteromer
W0NX70;
153-227
ZN;GOL;3CN;NO3;
Assess
Structure of Xanthomonas campestris effector protein XopD bound to ubiquitin Heteromer
Q3BYJ5;
153-227
Assess
Crystal structure of USP47 catalytic domain complex with ubiquitin Heteromer
Q22240;
153-227
ZN;
Assess
Structure of human USP28 bound to Ubiquitin-PA Heteromer
Q96RU2;
153-227
PG4;CL;
Assess
X-RAY STRUCTURE OF PEDV PAPAIN-LIKE PROTEASE 2 bound to UB-PA Heteromer
A0A059VJE6;
153-227
ZN;AYE;
Assess
USP34 catalytic domain in complex with UbPA Heteromer
Q70CQ2;
153-227
ZN;AYE;
Assess
Crystal structure of truncated USP1-UAF1 reacted with ubiquitin-prg Heteromer
O94782; Q8TAF3;
153-227
ZN;AYE;
Assess
Usp28 catalytic domain variant E593D in complex with UbPA Heteromer
Q96RU2;
153-227
SO4;AYE;
Assess
UCH-L5 in complex with ubiquitin-propargyl bound to an activating fragment of INO80G Heteromer
Q6P4R8; Q9Y5K5;
153-227
Assess
Active state Dot1L bound to the H2B-Ubiquitinated nucleosome, 2-to-1 complex Heteromer
P02281; P06897; P62799; P84233; Q8TEK3;
153-227
SAM;
Assess
Complex between RbBP5-WDR5 and an H2B-ubiquitinated nucleosome Heteromer
P02281; P02302; P06897; P61964; P62799; Q15291;
153-227
Assess
Complex between MLL1-WRAD and an H2B-ubiquitinated nucleosome Heteromer
B4DIJ7; P02281; P06897; P61964; P62799; P84233; Q15291; Q9C005; Q9UBL3;
153-227
SAH;ZN;
Assess
Structure of yeast Ubr1 in complex with Ubc2 and monoubiquitinated N-degron Heteromer
P06104; P19812;
153-227
ZN;Z3V;
Assess
cryo-EM structure of gammaH2AXK15ub-H4K20me2 nucleosome bound to 53BP1 Heteromer
O60814; P16104; P62805; P68431; Q12888;
153-227
Assess
Structure of HECT E3 UBR5 forming K48 linked Ubiquitin chains Heteromer
O95071;
153-227
SY8;
Assess
Structure of SAGA bound to TBP, including Spt8 and DUB Heteromer
C4QW33; C4QXP2; C4QY61; C4QYV4; C4QZ05; C4QZ39; C4QZA3; C4QZS5; C4R150; C4R1P1; C4R2A4; C4R2D9; C4R3E4; C4R4L4; C4R5C7; P13393;
153-227
Assess
Cryo-EM structure of USP16 bound to H2AK119Ub nucleosome Heteromer
O60814; P04908; P62805; P68431; Q9Y5T5;
153-227
Assess
Crystal structure of TAX1BP1 UBZ2 in complex with mono-ubiquitin Heteromer
Q86VP1;
153-226
ZN;
Assess
Lys29-linked di-ubiquitin Heteromer
P62987;
153-226
Assess
Crystal structure of monoubiquitinated TRIM21 RING (Ub-RING) In complex with ubiquitin charged Ube2… Heteromer
P0CG48; P19474; P61088; Q15819;
153-226
ZN;
Assess
Ubiquitin Variant bound to USP2 Heteromer
O75604;
153-226
ZN;SO4;
Assess
Crystal Structure of RNF165 in complex with a UbcH5b~Ub conjugate Heteromer
P62837; Q6ZSG1;
153-226
ZN;
Assess
Ubiquitin variant UbV.k.2 in complex with Ube2k Heteromer
P61086;
77-150
GOL;
Assess
CDC34A-Ubiquitin-2ab inhibitor complex Heteromer
P49427;
153-226
GZM;
Assess
Structure of parkin (R0RB) bound to two phospho-ubiquitin molecules Heteromer
Q9JK66;
153-226
ZN;PEG;EDO;
Assess
Crystal structure of the winged-helix domain of Cockayne syndrome group B protein in complex with u… Heteromer
Q59FF6;
153-226
GOL;
Assess
Ubiquitin Variant (UbV.Fl10.1) bound to a human Skp1-Fbl10 fragment complex. Heteromer
P63208; Q8NHM5;
152-225
Assess
The crystal structure of the MERS-CoV papain-like protease (C111S) with human ubiquitin Heteromer
K9N7C7;
155-228
IPA;ZN;
Assess
K63-polyUb MDA5CARDs complex Heteromer
Q9BYX4;
153-226
Assess
MDA5 CARDs-MAVS CARD polyUb complex Heteromer
Q7Z434; Q9BYX4;
153-226
Assess
Solution Structure of the human Polymerase iota UBM2-Ubiquitin Complex Heteromer
Q9UNA4;
153-226
Assess
Cryo-EM structure of SSX1 bound to the H2AK119Ub nucleosome at a resolution of 3.05 angstrom Heteromer
O60814; P04908; P62805; Q16385; Q71DI3;
153-226
Assess
H2BK120ub+H3K79me2-modified nucleosome ubiquitin position 5 Heteromer
A0A310TTQ1; P02281; P62799; Q6AZJ8;
153-226
Assess
The crystal structure of Papain-Like Protease of SARS CoV-2, C111S/D286N mutant, in complex with a … Heteromer
P0CG48; P0DTD1;
153-225
ZN;EDO;
Assess
Lys11-linked diubiquitin Heteromer
P62987;
153-225
NA;
Assess
Linear tri-ubiquitin Heteromer
P62987;
153-225
Assess
K11/K63-branched tri-Ubiquitin Heteromer
P62987;
153-225
Assess
Structure of DNMT1 RFTS domain in complex with ubiquitin Heteromer
P26358;
153-225
PO4;ZN;
Assess
Linear tetra-ubiquitin Heteromer
P62987;
153-225
Assess
Structure of Lpg2148/UBE2N-Ub complex Heteromer
P61088; Q5ZTL3;
153-225
Assess
Crystal structure of the A20 ZnF4 and ubiquitin complex Heteromer
P21580;
153-225
ZN;
Assess
Ubiquitin variant (UbV.Fbl10.1) bound to a human Skp1-Fbl11 fragment complex. Heteromer
P63208; Q9Y2K7;
153-225
Assess
H2BK120ub+H3K79me2-modified nucleosome ubiquitin position 6 Heteromer
A0A310TTQ1; P02281; P62799; Q6AZJ8;
153-225
Assess
H2AK119ub-modified nucleosome ubiquitin position 2 Heteromer
P02281; P62799; P84233; Q6AZJ8;
153-225
Assess
H2AK119ub-modified nucleosome ubiquitin position 1 Heteromer
P02281; P62799; P84233; Q6AZJ8;
153-225
Assess
Crystal structure of the ternary RPN13 PRU-RPN2 (940-953)-ubiquitin complex Heteromer
Q16186; Q99460;
153-224
Assess
Crystal structure of the RPN13 PRU-RPN2 (932-953)-ubiquitin complex Heteromer
Q16186; Q99460;
153-224
Assess
Crystal structure of a Ube2S-ubiquitin conjugate Heteromer
Q16763;
153-224
Assess
Crystal structure of human HDAC6 in complex with ubiquitin Heteromer
Q9UBN7;
157-228
12×ZN;
Assess
Structure of the fourth UIM (Ubiquitin Interacting Motif) of ANKRD13D in complex with a high affini… Heteromer
Q6ZTN6;
153-223
SO4;NA;
Assess
Ubiquitin variant UbV.k.1 in complex with Ube2k Heteromer
P0CG48; P61086;
77-147
Assess
E3 ubiquitin-protein ligase RNF8 in complex with Ubiquitin-conjugating enzyme E2 N and Polyubiquiti… Heteromer
O76064; P61088;
153-223
ZN;
Assess
USP46~ubiquitin BEA covalent complex Heteromer
P62068;
153-211
ZN;
Assess
Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c~Ub (UbcH5… Heteromer
P04908; P06899; P61077; P62805; P68431; Q8IYW5;
170-228
ZN;
Assess
Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c~Ub (UbcH5… Heteromer
P04908; P06899; P61077; P62805; P68431; Q8IYW5;
170-228
ZN;
Assess
Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c~Ub (UbcH5… Heteromer
P04908; P06899; P61077; P62805; P68431; Q8IYW5;
170-228
ZN;
Assess
Cryo-EM structure of the human nucleosome core particle ubiquitylated at histone H2A K15 in complex… Heteromer
P04908; P62805; P62807; P68431; Q8IYW5;
170-228
Assess
Cryo-EM structure of the human nucleosome core particle ubiquitylated at histone H2A K15 in complex… Heteromer
P04908; P62805; P62807; P68431; Q8IYW5;
170-228
Assess
Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c~Ub (UbcH5… Heteromer
P04908; P06899; P61077; P62805; P68431; Q8IYW5;
170-228
ZN;
Assess
Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c with back… Heteromer
P04908; P06899; P61077; P62805; P68431; Q8IYW5;
170-228
ZN;
Assess
Cryo-EM structure of the human nucleosome core particle ubiquitylated at histone H2A K15 in complex… Heteromer
P04908; P62805; P62807; P68431; Q8IYW5;
170-228
Assess
Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c with back… Heteromer
P04908; P06899; P61077; P62805; P68431; Q8IYW5;
170-228
ZN;
Assess
Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c~Ub (UbcH5… Heteromer
P04908; P06899; P61077; P62805; P68431; Q8IYW5;
170-228
ZN;
Assess
Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c~Ub (UbcH5… Heteromer
P04908; P06899; P61077; P62805; P68431; Q8IYW5;
170-228
ZN;
Assess
K11/48-branched teraubiquitinhomo-4-mer153-226
Assess
Cyclic Lys48-linked triubiquitinhomo-3-mer153-228
ZN;
Assess
Branched K48-K63-Ub3homo-3-mer153-228
GOL;
Assess
Lys6-linked tri-ubiquitinhomo-3-mer153-225
ZN;
Assess
The crystal structure of Lys48-linked di-ubiquitinhomo-2-mer77-225
ACT;
Assess
Crystal structure of K48-linked diubiquitin with F45W mutation in the proximal unithomo-2-mer153-228
SO4;
Assess
Representative 2-conformer ensembles of K27-linked Ub2 from RDC datahomo-2-mer153-228
Assess
Crystal structure of oxime-linked K6 diubiquitinhomo-2-mer153-227
10×ZN;ETA;
Assess
Crystal Structure of Semi-synthetic Ubiquitin with Phospho-Ser65 and Ala46Cyshomo-2-mer153-225
Assess
A dimeric ubiquitin formed by a single amino acid substitutionhomo-2-mer153-225
Assess
Representative 1-conformer ensembles of K27-linked Ub2 from RDC datahomo-2-mer153-224
Assess
Thr12 Phosphorylated Ubiquitinmonomer153-228
PO4;PEG;
Assess
Ser20 phosphorylated ubiquitinmonomer153-228
Assess
Crystal structure of DiUb-K6monomer153-228
PO4;
Assess
Relaxed state of S65-phosphorylated ubiquitinmonomer153-228
Assess
Solution structure of human ubiquitin with three alanine mutations in living eukaryotic cells by in…monomer153-228
Assess
UbKEKSmonomer153-228
Assess
Retracted state of S65-phosphorylated ubiquitinmonomer153-228
Assess
Retracted state of S65/T66 double-phosphorylated ubiquitinmonomer153-228
Assess
Relaxed state of S65/T66 double-phosphorylated ubiquitinmonomer153-228
Assess
Solution NMR ensemble for human ubiquitin at 298K compiled using the CoMAND methodmonomer153-228
Assess
The partially disordered conformation of ubiquitin (Q41N variant)monomer153-228
Assess
Room temperature structure of ubiquitin variant u7ub25.2540monomer151-225
SO4;
Assess
Crystal structure of SdeA-modified ubiquitin.monomer153-227
SO4;
Assess
Structure of S65D Phosphomimetic Ubiquitin Refined at 1.2 Angstroms Resolutionmonomer153-226
MG;
Assess
Human ubiquitin in the P1 space groupmonomer154-227
MG;
Assess
Ser65 phosphorylated ubiquitin, major conformationmonomer153-226
SO4;
Assess
Room temperature structure of ubiquitin variant u7ub25monomer151-223
SO4;
Assess
Observing the overall rocking motion of a protein in a crystal - Orthorhombic Ubiquitin crystals wi…monomer153-224
Assess
Crystal structure of Zn1.7-E16V human ubiquitin (hUb) mutant adduct, from a solution 70 mM zinc ace…monomer153-224
ZN;ACT;EDO;
Assess
Solid-state NMR structure of ubiquitinmonomer153-224
Assess
Crystal structure of Zn3-E16V human ubiquitin (hUb) mutant adduct, from a solution 70 mM zinc aceta…monomer153-223
ACT;ZN;
Assess

7 SWISS-MODEL models

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
5h07.1.Amonomer0.791-223
100.00
Assess
7yui.1.Amonomer0.781-229
99.56
Assess
5b83.2.Amonomer0.771-229
99.56
Assess
7rbs.1.Bmonomer0.7176-228
33.33
Assess
6oat.1.Bmonomer0.671-151
28.48
Assess
3ai5.1.Amonomer0.6142-147
74.07
Assess
3l0w.1.Bmonomer0.5477-210
67.94
Assess