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Coordinates: PDB Format Compare
Method: ELECTRON MICROSCOPY
Oligo State: hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands: None
Links: RCSB PDBe PDBe-KB PDBj PDBsum CATH
Citation: Papai, G. et al., Structure of SAGA and mechanism of TBP deposition on gene promoters. Nature (2020)
Release Date: 2020-02-12
Peptides: TATA-box Binding Protein (TBP): A
Transcriptional coactivator HFI1/ADA1: B
Subunit of SAGA histone acetyltransferase complex: C
Spt20: D
Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, interacts with Spt15p to act: E
Subunit of the SAGA transcriptional regulatory complex, involved in proper assembly of the complex: F
Transcription initiation factor TFIID subunit 10: G
Subunit (61/68 kDa) of TFIID and SAGA complexes: H
Subunit (90 kDa) of TFIID and SAGA complexes: I
Subunit (60 kDa) of TFIID and SAGA complexes: J
Subunit (17 kDa) of TFIID and SAGA complexes, involved in RNA polymerase II transcription initiation: K
Transcription-associated protein: L
Transcriptional regulator involved in glucose repression of Gal4p-regulated genes: M
Spt8: N
Polyubiquitin-B: O
Ubiquitin carboxyl-terminal hydrolase: P
SAGA-associated factor 11: Q
Transcription and mRNA export factor SUS1: R
SMTL:PDB: SMTL Chain Id:
PDB Chain Id:
A
M
B
A
C
C
D
F
E
D
F
E
G
J
H
K
I
G
J
H
K
I
L
L
M
B
N
N
O
R
P
Q
Q
O
R
P

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

TATA-box Binding Protein (TBP)

Transcriptional coactivator HFI1/ADA1

Subunit of SAGA histone acetyltransferase complex

Spt20

Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, interacts with Spt15p to act

Subunit of the SAGA transcriptional regulatory complex, involved in proper assembly of the complex

Transcription initiation factor TFIID subunit 10

Subunit (61/68 kDa) of TFIID and SAGA complexes

Subunit (90 kDa) of TFIID and SAGA complexes

Subunit (60 kDa) of TFIID and SAGA complexes

Subunit (17 kDa) of TFIID and SAGA complexes, involved in RNA polymerase II transcription initiation

Transcription-associated protein

Transcriptional regulator involved in glucose repression of Gal4p-regulated genes

Spt8

Polyubiquitin-B

Ubiquitin carboxyl-terminal hydrolase

SAGA-associated factor 11

Transcription and mRNA export factor SUS1

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