SMTL ID : 8c07.1

Structure of HECT E3 UBR5 forming K48 linked Ubiquitin chains

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-1-1-mer

Ligands

1 x SY8: 5-azanylpentan-2-one(Covalent)

SY8.1: 6 residues within 4Å: Chain A: N.2773, C.2775 Chain B: F.45, C.48, Y.59 Chain C: G.75 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:C.2775 Hydrophobic interactions: B:Y.59

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hehl, L.A. et al., Structural snapshots along K48-linked ubiquitin chain formation by the HECT E3 UBR5. Nat.Chem.Biol. (2024)

Release Date

2023-08-23

Peptides

E3 ubiquitin-protein ligase UBR5: AD
Polyubiquitin-B: B
Polyubiquitin-B: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

D
J

B
I

C
K

E3 ubiquitin-protein ligase UBR5

Polyubiquitin-B

Polyubiquitin-B

Related Entries With Identical Sequence