SMTL ID : 4tyl.1

Fragment-Based Screening of the Bromodomain of ATAD2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: R.9, R.12, R.16 3 PLIP interactions: 3 interactions with chain A Salt bridges: A:R.9, A:R.12, A:R.16

4 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 1 residues within 4Å: Chain A: R.99 Ligand excluded by PLIP CL.4: 3 residues within 4Å: Chain A: E.114, L.115, D.116 Ligand excluded by PLIP CL.5: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP CL.6: 1 residues within 4Å: Chain A: R.97 Ligand excluded by PLIP

1 x 39O: 5-amino-1,3,6-trimethyl-1,3-dihydro-2H-benzimidazol-2-one(Non-covalent)

39O.3: 7 residues within 4Å: Chain A: V.30, V.35, V.40, Y.43, Y.85, N.86, I.96 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:V.30, A:V.35, A:V.40 Hydrogen bonds: A:N.86 Water bridges: A:V.30, A:V.30, A:K.33

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Harner, M.J. et al., Fragment-Based Screening of the Bromodomain of ATAD2. J.Med.Chem. (2014)

Release Date

2014-10-29

Peptides

ATPase family AAA domain-containing protein 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ATPase family AAA domain-containing protein 2

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