SMTL ID : 6hia.1

The ATAD2 bromodomain in complex with compound 13

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x G7N: (2~{R})-~{N}-[5-(5-azanylpyridin-3-yl)-4-ethanoyl-1,3-thiazol-2-yl]-2-carbamimidamido-propanamide(Non-covalent)

G7N.1: 8 residues within 4Å: Chain A: V.30, K.33, V.35, V.40, Y.85, N.86, G.92, D.93 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:V.30, A:V.35 Hydrogen bonds: A:V.30, A:Y.85, A:Y.85, A:N.86, A:N.86 Water bridges: A:Y.85, A:Y.85 Salt bridges: A:D.93

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: R.9, R.12, R.16 5 PLIP interactions: 5 interactions with chain A Water bridges: A:R.16, A:R.16 Salt bridges: A:R.9, A:R.12, A:R.16

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dolbois, A. et al., Hitting a Moving Target: Simulation and Crystallography Study of ATAD2 Bromodomain Blockers. Acs Med.Chem.Lett. (2020)

Release Date

2019-02-20

Peptides

ATPase family AAA domain-containing protein 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ATPase family AAA domain-containing protein 2

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