SMTL ID : 5epb.1

Crystal structure of the bromodomain of human ATAD2 in complex with Compound 49

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

2 x 5QW: ~{N}-[(2~{S})-2-morpholin-4-ylpropyl]-4-oxidanylidene-3,5-dihydro-2~{H}-1,5-benzothiazepine-7-carboxamide(Non-covalent)

5QW.1: 7 residues within 4Å: Chain A: V.30, F.31, V.35, Y.85, N.86, I.96 Ligands: 5QW.2 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:V.30, A:F.31, A:I.96, A:I.96 Hydrogen bonds: A:N.86 Water bridges: A:R.29, A:G.92 5QW.2: 9 residues within 4Å: Chain A: R.29, V.30, T.32, K.33, P.34, V.35, D.36, V.40 Ligands: 5QW.1 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:V.40 Hydrogen bonds: A:T.32, A:K.33, A:D.36

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 3 residues within 4Å: Chain A: R.9, R.12, R.16 6 PLIP interactions: 6 interactions with chain A Water bridges: A:R.12, A:R.16, A:R.16 Salt bridges: A:R.9, A:R.12, A:R.16

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dong, J. et al., Crystal structure of the bromodomain of human ATAD2 in complex with Compound 49. To Be Published

Release Date

2016-11-23

Peptides

ATPase family AAA domain-containing protein 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ATPase family AAA domain-containing protein 2

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