SMTL ID : 7px5.1

ATAD2 in complex with 1-Methyl-2-quinolone

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.18 Å

Oligo State

monomer

Ligands

1 x 12Q: 1-METHYLQUINOLIN-2(1H)-ONE(Non-covalent)

12Q.1: 8 residues within 4Å: Chain A: V.30, V.35, E.39, V.40, Y.85, N.86, I.96 Ligands: EDO.3 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:V.30, A:V.35, A:V.40, A:Y.85 Hydrogen bonds: A:N.86

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 2 residues within 4Å: Chain A: R.89, R.94 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.89, A:R.94

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 2 residues within 4Å: Chain A: G.92 Ligands: 12Q.1 1 PLIP interactions: 1 interactions with chain A Water bridges: A:I.96 EDO.4: 1 residues within 4Å: Chain A: R.97 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.97 Water bridges: A:R.94 EDO.5: 2 residues within 4Å: Chain A: R.9, I.13 1 PLIP interactions: 1 interactions with chain A Water bridges: A:R.9

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Martin, M.P. et al., Exiting the tunnel of uncertainty: crystal soak to validated hit. Acta Crystallogr D Struct Biol (2022)

Release Date

2022-11-02

Peptides

ATPase family AAA domain-containing protein 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
AAA

ATPase family AAA domain-containing protein 2

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