SMTL ID : 4tz8.1

Structure of human ATAD2 bromodomain bound to fragment inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: R.9, R.12, R.16 4 PLIP interactions: 4 interactions with chain A Water bridges: A:R.16, A:R.16 Salt bridges: A:R.12, A:R.16 SO4.2: 2 residues within 4Å: Chain A: R.29, R.99 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.29, A:R.99

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 3 residues within 4Å: Chain A: E.114, L.115, D.116 Ligand excluded by PLIP

1 x 39U: 2-amino-7,7-dimethyl-5,6,7,8-tetrahydro-4H-[1,3]thiazolo[5,4-c]azepin-4-one(Non-covalent)

39U.4: 7 residues within 4Å: Chain A: V.30, K.33, V.35, V.40, Y.85, N.86, I.96 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:V.30, A:V.40 Hydrogen bonds: A:K.33, A:N.86, A:N.86

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Harner, M.J. et al., Fragment-Based Screening of the Bromodomain of ATAD2. J.Med.Chem. (2014)

Release Date

2014-10-29

Peptides

ATPase family AAA domain-containing protein 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ATPase family AAA domain-containing protein 2

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