SMTL ID : 6hid.1

The ATAD2 bromodomain in complex with compound 16

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.77 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: R.9, R.12, R.16 5 PLIP interactions: 5 interactions with chain A Water bridges: A:R.16, A:R.16 Salt bridges: A:R.9, A:R.12, A:R.16

2 x G7E: ~{N}-[4-ethanoyl-5-(4-morpholin-4-ylcarbonylphenyl)-1,3-thiazol-2-yl]piperazine-2-carboxamide(Non-covalent)

G7E.2: 11 residues within 4Å: Chain A: R.29, V.30, K.33, P.34, V.35, D.36, Y.85, N.86, D.90, D.93, I.96 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:V.30, A:V.35 Hydrogen bonds: A:D.36, A:N.86, A:N.86 Water bridges: A:Y.85 G7E.3: 6 residues within 4Å: Chain A: E.10, F.14, E.114, L.115, D.116, F.119 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:D.116 Hydrogen bonds: A:D.116

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dolbois, A. et al., Hitting a Moving Target: Simulation and Crystallography Study of ATAD2 Bromodomain Blockers. Acs Med.Chem.Lett. (2020)

Release Date

2019-02-20

Peptides

ATPase family AAA domain-containing protein 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ATPase family AAA domain-containing protein 2

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