SMTL ID : 4y7n.1

The Structure Insight into 5-Carboxycytosine Recognition by RNA Polymerase II during Transcription Elongation.

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 3.30 Å
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-mer
Ligands
1 x A- U- G- G- A- G- A- G- G: RNA (5'-D(*AP*UP*GP*GP*AP*GP*AP*GP*G)-3')(Non-covalent)
8 x ZN: ZINC ION(Non-covalent)
2 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)
1 x G2P: PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Wang, L. et al., Molecular basis for 5-carboxycytosine recognition by RNA polymerase II elongation complex. Nature (2015)
Release Date
2015-07-15
Peptides
DNA-directed RNA polymerase II subunit RPB1: A
DNA-directed RNA polymerase II subunit RPB2,DNA-directed RNA polymerase II subunit RPB2: B
DNA-directed RNA polymerase II subunit RPB3: C
DNA-directed RNA polymerases I, II, and III subunit RPABC1: D
DNA-directed RNA polymerases I, II, and III subunit RPABC2: E
DNA-directed RNA polymerases I, II, and III subunit RPABC3: F
DNA-directed RNA polymerase II subunit RPB9: G
DNA-directed RNA polymerases I, II, and III subunit RPABC5: H
DNA-directed RNA polymerase II subunit RPB11: I
DNA-directed RNA polymerases I, II, and III subunit RPABC4: J
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C
D
E
E
F
F
H
G
I
H
J
I
K
J
L

DNA-directed RNA polymerase II subunit RPB1

DNA-directed RNA polymerase II subunit RPB2,DNA-directed RNA polymerase II subunit RPB2

DNA-directed RNA polymerase II subunit RPB3

DNA-directed RNA polymerases I, II, and III subunit RPABC1

DNA-directed RNA polymerases I, II, and III subunit RPABC2

DNA-directed RNA polymerases I, II, and III subunit RPABC3

DNA-directed RNA polymerase II subunit RPB9

DNA-directed RNA polymerases I, II, and III subunit RPABC5

DNA-directed RNA polymerase II subunit RPB11

DNA-directed RNA polymerases I, II, and III subunit RPABC4

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1dzf.1 | 1i3q.1 | 1i50.1 | 1i50.2 | 1i6h.1 | 1k83.1 | 1nik.1 | 1r5u.1 | 1r9s.1 | 1r9t.1 | 1sfo.1 | 1twa.1 | 1twc.1 | 1twf.1 | 1twf.2 | 1twg.1 | 1twg.2 | 1twg.3 | 1twh.1 | 1wcm.1 | 1y1v.1 | 1y1w.1 | 1y77.1 | 2b63.1 | 2b8k.1 | 2e2h.1 | 2e2i.1 | 2e2j.1 | 2ja5.1 | 2ja6.1  more...