SMTL ID : 7o4k.1

Yeast TFIIH in the contracted state within the pre-initiation complex

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
1 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
10 x ZN: ZINC ION(Non-covalent)
1 x BEF: BERYLLIUM TRIFLUORIDE ION(Non-covalent)
1 x MG: MAGNESIUM ION(Non-covalent)
1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Schilbach, S. et al., Structure of RNA polymerase II pre-initiation complex at 2.9 angstrom defines initial DNA opening. Cell (2021)
Release Date
2021-06-16
Peptides
General transcription and DNA repair factor IIH helicase subunit XPD: A
General transcription and DNA repair factor IIH subunit TFB1: B
General transcription and DNA repair factor IIH subunit TFB2: C
RNA polymerase II transcription factor B subunit 3: D
General transcription and DNA repair factor IIH subunit TFB4: E
General transcription and DNA repair factor IIH subunit TFB5: F
General transcription and DNA repair factor IIH subunit SSL1: G
General transcription and DNA repair factor IIH helicase subunit XPB: H
DNA-directed RNA polymerase II subunit RPB1: I
DNA-directed RNA polymerase II subunit RPB2: J
DNA-directed RNA polymerase II subunit RPB4: K
DNA-directed RNA polymerases I, II, and III subunit RPABC2: L
DNA-directed RNA polymerase II subunit RPB7: M
Transcription initiation factor IIE subunit alpha: P
Transcription initiation factor IIE subunit beta: Q
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
0
B
1
C
2
D
3
E
4
F
5
G
6
H
7
I
A
J
B
K
D
L
F
M
G
P
W
Q
X

General transcription and DNA repair factor IIH helicase subunit XPD

General transcription and DNA repair factor IIH subunit TFB1

General transcription and DNA repair factor IIH subunit TFB2

RNA polymerase II transcription factor B subunit 3

General transcription and DNA repair factor IIH subunit TFB4

General transcription and DNA repair factor IIH subunit TFB5

General transcription and DNA repair factor IIH subunit SSL1

General transcription and DNA repair factor IIH helicase subunit XPB

DNA-directed RNA polymerase II subunit RPB1

DNA-directed RNA polymerase II subunit RPB2

DNA-directed RNA polymerase II subunit RPB4

DNA-directed RNA polymerases I, II, and III subunit RPABC2

DNA-directed RNA polymerase II subunit RPB7

Transcription initiation factor IIE subunit alpha

Transcription initiation factor IIE subunit beta

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1i3q.1 | 1i50.1 | 1i50.2 | 1i6h.1 | 1k83.1 | 1nik.1 | 1r5u.1 | 1r9s.1 | 1r9t.1 | 1sfo.1 | 1twa.1 | 1twc.1 | 1twf.1 | 1twf.2 | 1twg.1 | 1twg.2 | 1twg.3 | 1twh.1 | 1wcm.1 | 1y1v.1 | 1y1w.1 | 1y77.1 | 2b63.1 | 2b8k.1 | 2e2h.1 | 2e2i.1 | 2e2j.1 | 2ja5.1 | 2ja6.1 | 2ja7.1  more...