SMTL ID : 5m75.1

Cocrystal structure of cAMP-dependent Protein Kinase (PKA) in complex with a (S)-methyl substitued Fasudil-derivative

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.54 Å

Oligo State

hetero-1-1-mer

Ligands

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.1: 7 residues within 4Å: Chain A: V.18, F.21, F.103, L.155, K.295, I.306, Y.309 4 PLIP interactions: 4 interactions with chain A Water bridges: A:E.158, A:K.295 pi-Cation interactions: A:F.21, A:Y.309

1 x 9K6: 5-[[(2~{S})-2-methyl-1,4-diazepan-1-yl]sulfonyl]isoquinoline(Non-covalent)

9K6.2: 18 residues within 4Å: Chain A: L.52, G.53, T.54, F.57, V.60, A.73, V.107, M.123, E.124, Y.125, V.126, E.130, E.173, N.174, L.176, T.186, D.187, F.330 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:V.60, A:V.60, A:A.73, A:L.176, A:T.186, A:F.330 Hydrogen bonds: A:V.126 Water bridges: A:E.130, A:E.173 Salt bridges: A:D.187

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wienen-Schmidt, B. et al., Cocrystal structure of cAMP-dependent Protein Kinase (PKA) in complex with differently methylated Fasudil-derived ligands. To be Published

Release Date

2018-06-06

Peptides

cAMP-dependent protein kinase catalytic subunit alpha: A
cAMP-dependent protein kinase inhibitor alpha: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

cAMP-dependent protein kinase catalytic subunit alpha

cAMP-dependent protein kinase inhibitor alpha

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