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SMTL ID : 6n4b.1

Cannabinoid Receptor 1-G Protein Complex

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY 3.00 Å

Oligo State

hetero-1-1-1-1-1-mer

Ligands

1 x KCA: methyl N-{1-[(4-fluorophenyl)methyl]-1H-indazole-3-carbonyl}-3-methyl-L-valinate(Non-covalent)

KCA.1:

9 residues within 4Å:

Chain D: F.185, S.188, F.189, F.192, H.193, V.211, T.212, F.215, F.283

8 PLIP interactions:

8 interactions with chain D

Hydrophobic interactions: D:F.192, D:F.215, D:F.283, D:F.283
Salt bridges: D:H.193
pi-Stacking: D:F.283, D:W.294, D:W.294

2 x CLR: CHOLESTEROL(Non-covalent)

CLR.2:	4 residues within 4Å: Chain D: I.231, H.234, I.242 Ligands: CLR.3 3 PLIP interactions: 3 interactions with chain D Hydrophobic interactions: D:I.231, D:I.242, D:I.242
CLR.3:	6 residues within 4Å: Chain D: K.247, A.251, L.254, M.255, I.258 Ligands: CLR.2 6 PLIP interactions: 6 interactions with chain D Hydrophobic interactions: D:K.247, D:A.251, D:L.254, D:M.255, D:I.258, D:I.258

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Krishna Kumar, K. et al., Structure of a Signaling Cannabinoid Receptor 1-G Protein Complex. Cell (2019)

Release Date

2019-01-30

Peptides

Guanine nucleotide-binding protein G(i) subunit alpha-1: A
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1: B
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2: C
Cannabinoid receptor 1: D
scFv16: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
R

E
S

Membrane

We predict this structure to be a membrane protein.
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Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Guanine nucleotide-binding protein G(i) subunit alpha-1

Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2

Cannabinoid receptor 1

scFv16

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Cartoon
Tube
Trace
Lines
Ball+Stick
Licorice
Hyperball
Rope
Surface
Spacefill
Outline
Fog

Background

Transparent

Resolution

Low
Medium
High
Extreme

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