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SMTL ID : 6pb1.1

Cryo-EM structure of Urocortin 1-bound Corticotropin-releasing factor 2 receptor in complex with Gs protein and Nb35

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-1-mer

Ligands

4 x CLR: CHOLESTEROL(Non-covalent)

CLR.1:	4 residues within 4Å: Chain A: V.117, Y.120, L.121, V.125 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:V.117, A:Y.120, A:Y.120, A:L.121, A:V.125
CLR.2:	5 residues within 4Å: Chain A: A.128, A.132, F.360, R.366, R.370 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:A.132, A:F.360, A:F.360, A:R.366
CLR.3:	8 residues within 4Å: Chain A: V.181, R.184, C.185, T.188, I.189, W.254 Ligands: CLR.4, PLM.9 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:V.181, A:V.181, A:T.188, A:I.189, A:W.254, A:W.254
CLR.4:	5 residues within 4Å: Chain A: W.152, I.189, L.227, W.231 Ligands: CLR.3 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:I.189, A:L.227, A:L.227, A:W.231

5 x PLM: PALMITIC ACID(Non-covalent)

PLM.5:	2 residues within 4Å: Chain A: V.181, C.185 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:V.181
PLM.6:	6 residues within 4Å: Chain A: L.312, V.313, L.324, F.342, F.357, F.361 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:V.313
PLM.7:	3 residues within 4Å: Chain A: V.213, F.281, R.287 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:V.213, A:F.281 Salt bridges: A:R.287
PLM.8:	2 residues within 4Å: Chain A: L.167, L.170 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:L.167, A:L.170
PLM.9:	4 residues within 4Å: Chain A: C.224, L.227, F.235 Ligands: CLR.3 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:L.227, A:F.235, A:F.235

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Ma, S. et al., Molecular Basis for Hormone Recognition and Activation of Corticotropin-Releasing Factor Receptors. Mol.Cell (2020)

Release Date

2020-02-12

Peptides

Corticotropin-releasing factor receptor 2: A
Urocortin: B
Guanine nucleotide-binding protein G(s) subunit alpha isoforms short,Guanine nucleotide-binding protein G(i) subunit alpha-1,Guanine nucleotide-binding protein G(s) subunit alpha isoforms short: C
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1: D
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2: E
Nanobody 35: F

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
P

B
U

C
A

D
B

E
G

F
N

Membrane

We predict this structure to be a membrane protein.
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Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Corticotropin-releasing factor receptor 2

Urocortin

Guanine nucleotide-binding protein G(s) subunit alpha isoforms short,Guanine nucleotide-binding protein G(i) subunit alpha-1,Guanine nucleotide-binding protein G(s) subunit alpha isoforms short

Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2

Nanobody 35

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7qvm.1 | 7ra3.1 | 7ran.1 | 7rbt.1 | 7rg9.1 | 7rgp.1 | 7s8l.1 | 7s8m.1 | 7s8n.1 | 7s8o.1 | 7s8p.1 | 7sbf.1 | 7scg.1 | 7sf7.1 | 7sf8.1 | 7srr.1 | 7t10.1 | 7t11.1 | 7t2g.1 | 7t2h.1 | 7t6b.1 | 7t8x.1 | 7t90.1 | 7t94.1 | 7t96.1 | 7t9i.1 | 7t9n.1 | 7tmw.1 | 7try.1 | 7ts0.1 | 7tuz.1 | 7tyf.1 | 7tyh.1 | 7tyi.1 | 7tyl.1 | 7tyn.1 | 7tyo.1 | 7tyw.1 | 7tyx.1 | 7tyy.1 | 7tzf.1 | 7u2k.1 | 7u2l.1 | 7um5.1 | 7um6.1 | 7um7.1 | 7utz.1 | 7v35.1 | 7v68.1 | 7v69.1 | 7v6a.1 | 7v9l.1 | 7v9m.1 | 7vab.1 | 7vbh.1 | 7vbi.1 | 7vfx.1 | 7vie.1 | 7vif.1 | 7vig.1 | 7vih.1 | 7vkt.1 | 7vl8.1 | 7vl9.1 | 7vla.1 | 7vqx.1 | 7vug.1 | 7vuh.1 | 7vui.1 | 7vuj.1 | 7w0l.1 | 7w0m.1 | 7w0n.1 | 7w0o.1 | 7w0p.1 | 7w2z.1 | 7w55.1 | 7w57.1 | 7w6p.1 | 7w7e.1 | 7wbj.1 | 7wcm.1 | 7wcn.1 | 7wf7.1 | 7wic.1 | 7wig.1 | 7wj5.1 | 7wkd.1 | 7wq3.1 | 7wq4.1 | 7wu2.1 | 7wu3.1 | 7wu4.1 | 7wu5.1 | 7wu9.1 | 7wuj.1 | 7wuq.1 | 7wv9.1 | 7wvu.1 | 7wvv.1 | 7wvw.1 | 7wvx.1 | 7wvy.1 | 7wxu.1 | 7wxw.1 | 7wy0.1 | 7wy5.1 | 7wy8.1 | 7wyb.1 | 7wz4.1 | 7wz7.1 | 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8gee.1 | 8gef.1 | 8geg.1 | 8geh.1 | 8gei.1 | 8gej.1 | 8gfv.1 | 8gfw.1 | 8gfx.1 | 8gfy.1 | 8gfz.1 | 8gg0.1 | 8gg1.1 | 8gg2.1 | 8gg3.1 | 8gg4.1 | 8gg5.1 | 8gg6.1 | 8gg7.1 | 8gg8.1 | 8gg9.1 | 8gga.1 | 8ggb.1 | 8ggc.1 | 8gge.1 | 8ggf.1 | 8ghv.1 | 8guq.1 | 8gur.1 | 8gus.1 | 8gut.1 | 8gy7.1 | 8h0p.1 | 8h0q.1 | 8h4i.1 | 8h4k.1 | 8h4l.1 | 8h8j.1 | 8ha0.1 | 8haf.1 | 8hao.1 | 8hbd.1 | 8hcq.1 | 8hcx.1 | 8hdo.1 | 8hdp.1 | 8hj5.1 | 8hk2.1 | 8hk3.1 | 8hk5.1 | 8hn8.1 | 8hnk.1 | 8hnl.1 | 8hnm.1 | 8hoc.1 | 8hqc.1 | 8hsc.1 | 8hti.1 | 8i2g.1 | 8i95.1 | 8i97.1 | 8i9a.1 | 8i9l.1 | 8i9s.1 | 8ia2.1 | 8ia7.1 | 8ia8.1 | 8id3.1 | 8id4.1 | 8id6.1 | 8id8.1 | 8id9.1 | 8iec.1 | 8ied.1 | 8ikg.1 | 8ikh.1 | 8ikl.1 | 8inr.1 | 8ioc.1 | 8iod.1 | 8iq4.1 | 8iq6.1 | 8irs.1 | 8irt.1 | 8iru.1 | 8irv.1 | 8itl.1 | 8itm.1 | 8iu2.1 | 8iuk.1 | 8iul.1 | 8ium.1 | 8iy9.1 | 8iyh.1 | 8iys.1 | 8iyw.1 | 8iz4.1 | 8izb.1 | 8j18.1 | 8j19.1 | 8j1a.1 | 8j20.1 | 8j21.1 | 8j22.1 | 8j23.1 | 8j24.1 | 8j6d.1 | 8jbf.1 | 8jbg.1 | 8jbh.1 | 8jd3.1 | 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8wrb.1 | 8wss.1 | 8wst.1 | 8ww2.1 | 8wwh.1 | 8wwi.1 | 8wwj.1 | 8wwk.1 | 8wwl.1 | 8wwm.1 | 8wwn.1 | 8wz2.1 | 8x16.1 | 8x17.1 | 8x2k.1 | 8x79.1 | 8x7a.1 | 8xgu.1 | 8xio.1 | 8xip.1 | 8xiq.1 | 8xir.1 | 8xjk.1 | 8xjl.1 | 8xjm.1 | 8xjn.1 | 8xjo.1 | 8xof.1 | 8xog.1 | 8xoh.1 | 8xoi.1 | 8xoj.1 | 8xql.1 | 8xqn.1 | 8xqo.1 | 8xqp.1 | 8xqr.1 | 8xqs.1 | 8xqt.1 | 8xve.1 | 8xvh.1 | 8xvi.1 | 8xwp.1 | 8xwq.1 | 8xzf.1 | 8xzg.1 | 8xzh.1 | 8xzi.1 | 8xzj.1 | 8y52.1 | 8y53.1 | 8ykv.1 | 8ykw.1 | 8ykx.1 | 8yky.1 | 8yn2.1 | 8yn3.1 | 8yn4.1 | 8yn5.1 | 8yn6.1 | 8yn7.1 | 8yn8.1 | 8yn9.1 | 8yna.1 | 8yrg.1 | 8yut.1 | 8yuu.1 | 8yuv.1 | 8yw3.1 | 8yw4.1 | 8yw5.1 | 8zbe.1 | 8zcj.1 | 8zjd.1 | 8zje.1 | 8zr5.1 | 8zrk.1 | 8zsj.1 | 8zsp.1 | 8zss.1 | 8zsv.1 | 8zx4.1 | 8zx5.1 | 9asb.1 | 9auc.1 | 9avg.1 | 9avl.1 | 9axf.1 | 9ayf.1 | 9bkk.1 | 9bqj.1 | 9erx.1 | 9gyo.1 | 9ivm.1

Cartoon
Tube
Trace
Lines
Ball+Stick
Licorice
Hyperball
Rope
Surface
Spacefill
Outline
Fog

Background

Transparent

Resolution

Low
Medium
High
Extreme

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