SMTL ID : 7c2e.1

GLP-1R-Gs complex structure with a small molecule full agonist

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-mer

Ligands

1 x FFR: 2-[[4-[6-[(4-cyano-2-fluoranyl-phenyl)methoxy]pyridin-2-yl]-3,6-dihydro-2~{H}-pyridin-1-yl]methyl]-3-[[(2~{S})-oxetan-2-yl]methyl]imidazo[4,5-b]pyridine-5-carboxylic acid(Non-covalent)

FFR.1: 16 residues within 4Å: Chain E: L.41, W.42, V.45, Q.46, L.150, K.206, L.210, M.213, L.227, D.231, F.239, C.305, T.307, R.389, F.390, L.393 13 PLIP interactions: 13 interactions with chain E Hydrophobic interactions: E:V.45, E:L.150, E:L.210, E:L.227, E:L.227, E:F.239, E:F.390, E:L.393 Hydrogen bonds: E:Q.46, E:T.307 Salt bridges: E:R.389 pi-Stacking: E:F.239 Halogen bonds: E:L.41

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ma, H. et al., Structural insights into the activation of GLP-1R by a small molecule agonist. Cell Res. (2020)

Release Date

2020-08-26

Peptides

Guanine nucleotide-binding protein G(s) subunit alpha isoforms short: A
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1: B
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2: C
Nanobody 35|Lama glama: D
Glucagon-like peptide 1 receptor: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
G

D
N

E
R

Membrane

We predict this structure to be a membrane protein.
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Guanine nucleotide-binding protein G(s) subunit alpha isoforms short

Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2

Nanobody 35|Lama glama

Glucagon-like peptide 1 receptor

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