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SMTL ID : 7tyw.1

Human Amylin1 Receptor in complex with Gs and salmon calcitonin peptide

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-1-1-mer

Ligands

2 x PLM: PALMITIC ACID(Non-covalent)

PLM.1:	5 residues within 4Å: Chain A: P.122, F.123, P.127 Chain C: I.284, Y.292 6 PLIP interactions: 3 interactions with chain C, 3 interactions with chain A Hydrophobic interactions: C:I.284, C:I.284, C:Y.292, A:F.123, A:F.123, A:P.127
PLM.6:	5 residues within 4Å: Chain A: I.128 Chain C: Y.307, M.314, A.315, W.369 3 PLIP interactions: 2 interactions with chain C, 1 interactions with chain A Hydrophobic interactions: C:M.314, C:A.315, A:I.128

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2:	4 residues within 4Å: Chain C: W.136, N.138, T.140, M.141 No protein-ligand interaction detected (PLIP)
NAG.3:	2 residues within 4Å: Chain C: Y.73, N.81 1 PLIP interactions: 1 interactions with chain C Hydrophobic interactions: C:Y.73

2 x Y01: CHOLESTEROL HEMISUCCINATE(Non-covalent)

Y01.4:	10 residues within 4Å: Chain C: N.194, L.197, L.201, I.205, F.233, Y.236, M.237, Y.271, W.275 Ligands: Y01.5 7 PLIP interactions: 7 interactions with chain C Hydrophobic interactions: C:L.201, C:I.205, C:Y.236, C:W.275, C:W.275, C:W.275, C:W.275
Y01.5:	6 residues within 4Å: Chain C: F.233, Y.236, Y.271, L.272, L.279 Ligands: Y01.4 6 PLIP interactions: 6 interactions with chain C Hydrophobic interactions: C:F.233, C:Y.236, C:Y.271, C:L.272, C:L.279, C:L.279

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Cao, J. et al., A structural basis for amylin receptor phenotype. Science (2022)

Release Date

2022-03-23

Peptides

Receptor activity-modifying protein 1: A
Calcitonin-1: B
Calcitonin receptor: C
Guanine nucleotide-binding protein G(s) subunit alpha isoforms short: D
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1: E
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2: F
nanobody 35: G

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
P

C
R

D
A

E
B

F
G

G
N

Membrane

We predict this structure to be a membrane protein.
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Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Receptor activity-modifying protein 1

Calcitonin-1

Calcitonin receptor

Guanine nucleotide-binding protein G(s) subunit alpha isoforms short

Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2

nanobody 35

Related Entries With Identical Sequence

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7ld4.1 | 7mbx.1 | 7mby.1 | 7mts.1 | 7p00.1 | 7p02.1 | 7piu.1 | 7piv.1 | 7qvm.1 | 7ra3.1 | 7ran.1 | 7rbt.1 | 7rg9.1 | 7rgp.1 | 7s1m.1 | 7s3i.1 | 7s8l.1 | 7s8m.1 | 7s8n.1 | 7s8o.1 | 7s8p.1 | 7sbf.1 | 7scg.1 | 7sf7.1 | 7sf8.1 | 7srr.1 | 7t10.1 | 7t11.1 | 7t2g.1 | 7t2h.1 | 7t6b.1 | 7t8x.1 | 7t90.1 | 7t94.1 | 7t96.1 | 7t9i.1 | 7t9n.1 | 7tmw.1 | 7try.1 | 7ts0.1 | 7tuz.1 | 7tyf.1 | 7tyh.1 | 7tyi.1 | 7tyl.1 | 7tyn.1 | 7tyo.1 | 7tyx.1 | 7tyy.1 | 7tzf.1 | 7u2k.1 | 7u2l.1 | 7um5.1 | 7um6.1 | 7um7.1 | 7utz.1 | 7v35.1 | 7v68.1 | 7v69.1 | 7v6a.1 | 7v9l.1 | 7v9m.1 | 7vfx.1 | 7vie.1 | 7vif.1 | 7vig.1 | 7vih.1 | 7vkt.1 | 7vl8.1 | 7vl9.1 | 7vla.1 | 7vqx.1 | 7vug.1 | 7vuh.1 | 7vui.1 | 7vuj.1 | 7w0l.1 | 7w0m.1 | 7w0n.1 | 7w0o.1 | 7w0p.1 | 7w2z.1 | 7w6p.1 | 7w7e.1 | 7wbj.1 | 7wcm.1 | 7wcn.1 | 7wf7.1 | 7wj5.1 | 7wkd.1 | 7wq3.1 | 7wq4.1 | 7wu2.1 | 7wu3.1 | 7wu4.1 | 7wu5.1 | 7wu9.1 | 7wuj.1 | 7wuq.1 | 7wv9.1 | 7wvu.1 | 7wvv.1 | 7wvw.1 | 7wvx.1 | 7wvy.1 | 7wxu.1 | 7wxw.1 | 7wy0.1 | 7wy5.1 | 7wy8.1 | 7wyb.1 | 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8geg.1 | 8geh.1 | 8gei.1 | 8gej.1 | 8gfv.1 | 8gfw.1 | 8gfx.1 | 8gfy.1 | 8gfz.1 | 8gg0.1 | 8gg1.1 | 8gg2.1 | 8gg3.1 | 8gg4.1 | 8gg5.1 | 8gg6.1 | 8gg7.1 | 8gg8.1 | 8gg9.1 | 8gga.1 | 8ggb.1 | 8ggc.1 | 8gge.1 | 8ggf.1 | 8ghv.1 | 8guq.1 | 8gur.1 | 8gus.1 | 8gut.1 | 8gy7.1 | 8h0p.1 | 8h0q.1 | 8h4i.1 | 8h4k.1 | 8h4l.1 | 8h8j.1 | 8ha0.1 | 8haf.1 | 8hao.1 | 8hbd.1 | 8hcq.1 | 8hcx.1 | 8hdo.1 | 8hdp.1 | 8hj5.1 | 8hn8.1 | 8hnk.1 | 8hnl.1 | 8hnm.1 | 8hoc.1 | 8hqc.1 | 8hsc.1 | 8hti.1 | 8i2g.1 | 8i95.1 | 8i97.1 | 8i9a.1 | 8i9l.1 | 8i9s.1 | 8ia2.1 | 8ia8.1 | 8id3.1 | 8id4.1 | 8id6.1 | 8id8.1 | 8id9.1 | 8iec.1 | 8ied.1 | 8ikg.1 | 8ikh.1 | 8ikl.1 | 8inr.1 | 8ioc.1 | 8iod.1 | 8iq4.1 | 8iq6.1 | 8irs.1 | 8irt.1 | 8iru.1 | 8irv.1 | 8itl.1 | 8itm.1 | 8iu2.1 | 8iuk.1 | 8iul.1 | 8ium.1 | 8iy9.1 | 8iyh.1 | 8iys.1 | 8iyw.1 | 8iz4.1 | 8izb.1 | 8j18.1 | 8j19.1 | 8j1a.1 | 8j20.1 | 8j21.1 | 8j22.1 | 8j23.1 | 8j24.1 | 8j6d.1 | 8jbf.1 | 8jbg.1 | 8jbh.1 | 8jd3.1 | 8jd5.1 | 8jd6.1 | 8jer.1 | 8jhn.1 | 8jhy.1 | 8jii.1 | 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Cartoon
Tube
Trace
Lines
Ball+Stick
Licorice
Hyperball
Rope
Surface
Spacefill
Outline
Fog

Background

Transparent

Resolution

Low
Medium
High
Extreme

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