SMTL ID : 7u2l.1

C5guano-uOR-Gi-scFv16

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-mer

Ligands

1 x L0X: N-(5-carbamimidamidopentyl)-N-[1-(2-phenylethyl)piperidin-4-yl]propanamide(Non-covalent)

L0X.1: 18 residues within 4Å: Chain D: D.112, A.115, Q.122, N.125, W.131, V.141, I.142, D.145, Y.146, M.149, W.291, I.294, H.295, V.298, I.320, G.323, Y.324, S.327 17 PLIP interactions: 17 interactions with chain D Hydrophobic interactions: D:Q.122, D:W.131, D:W.131, D:V.141, D:I.142, D:Y.146, D:W.291, D:I.294, D:V.298, D:I.320, D:Y.324 Hydrogen bonds: D:D.112, D:Q.122, D:N.148, D:S.327, D:S.327 Salt bridges: D:D.145

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Faouzi, A. et al., Structure-based design of bitopic ligands for the μ-opioid receptor. Nature (2023)

Release Date

2022-05-04

Peptides

Guanine nucleotide-binding protein G(i) subunit alpha-1: A
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1: B
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2: C
Mu-type opioid receptor: D
scFv16: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

Membrane

We predict this structure to be a membrane protein.
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Guanine nucleotide-binding protein G(i) subunit alpha-1

Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2

Mu-type opioid receptor

scFv16

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