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SMTL ID : 8fn0.1

CryoEM structure of Go-coupled NTSR1 with a biased allosteric modulator

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-mer

Ligands

1 x ARG- ARG- PRO- TYR- ILE- LEU: Neurotensin/neuromedin N(Non-covalent)

ARG-ARG-PRO-TYR-ILE-LEU.1:

14 residues within 4Å:

Chain A: D.39, L.40, F.113, H.117, Y.131, M.193, V.209, C.210, T.211, P.212, R.312, F.316, W.324, Y.332

10 PLIP interactions:

10 interactions with chain A

Hydrophobic interactions: A:F.113, A:V.209, A:P.212, A:F.316, A:W.324, A:Y.332
Hydrogen bonds: A:D.39, A:H.117, A:T.211
Salt bridges: A:R.312

1 x SRW: 2-[{2-(1-fluorocyclopropyl)-4-[4-(2-methoxyphenyl)piperidin-1-yl]quinazolin-6-yl}(methyl)amino]ethan-1-ol(Non-covalent)

SRW.2:

15 residues within 4Å:

Chain A: L.91, V.145, L.148, S.149, R.152, I.156, N.242, V.294, L.295, V.298, Y.354
Chain D: L.222, C.225, G.226, L.227

7 PLIP interactions:

7 interactions with chain A

Hydrophobic interactions: A:V.145, A:L.148, A:I.156, A:V.294, A:L.295, A:V.298
Hydrogen bonds: A:R.152

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Krumm, B.E. et al., Neurotensin Receptor Allosterism Revealed in Complex with a Biased Allosteric Modulator. Biochemistry (2023)

Release Date

2023-03-29

Peptides

Neurotensin receptor type 1: A
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1: B
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2: C
MiniGo: D
scFv16: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

C
D

D
B

E
E

Membrane

We predict this structure to be a membrane protein.
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Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Neurotensin receptor type 1

Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2

MiniGo

scFv16

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Cartoon
Tube
Trace
Lines
Ball+Stick
Licorice
Hyperball
Rope
Surface
Spacefill
Outline
Fog

Background

Transparent

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