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SMTL ID : 8vy7.1

CryoEM structure of Gi-coupled TAS2R14 with cholesterol and an intracellular tastant

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-mer

Ligands

1 x 01: 4-methyl-N-[(2M)-2-(1H-tetrazol-5-yl)phenyl]-6-(trifluoromethyl)pyrimidin-2-amine

01.1:

13 residues within 4Å:

Chain A: L.353
Chain E: G.255, Y.258, I.262, S.345, M.348, F.349, L.352, G.380, V.381, V.384, F.388, H.427

6 PLIP interactions:

6 interactions with chain E

Hydrophobic interactions: E:Y.258, E:M.348, E:F.349, E:V.384
Hydrogen bonds: E:S.345
pi-Stacking: E:F.349

1 x CLR: CHOLESTEROL(Non-covalent)

CLR.2:

14 residues within 4Å:

Chain E: S.216, F.227, F.233, T.237, W.240, R.325, V.331, I.338, Y.391, F.398, I.413, S.416, M.419, G.420

10 PLIP interactions:

10 interactions with chain E

Hydrophobic interactions: E:F.227, E:W.240, E:W.240, E:V.331, E:V.331, E:I.338, E:I.338, E:F.398, E:I.413
Hydrogen bonds: E:R.325

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Kim, Y. et al., Bitter taste receptor activation by cholesterol and an intracellular tastant. Nature (2024)

Release Date

2024-04-03

Peptides

Guanine nucleotide-binding protein G(i) subunit alpha-1: A
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1: B
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2: C
scFv16: D
Taste receptor type 2 member 14: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
R

Membrane

We predict this structure to be a membrane protein.
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Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Guanine nucleotide-binding protein G(i) subunit alpha-1

Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2

scFv16

Taste receptor type 2 member 14

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Cartoon
Tube
Trace
Lines
Ball+Stick
Licorice
Hyperball
Rope
Surface
Spacefill
Outline
Fog

Background

Transparent

Resolution

Low
Medium
High
Extreme

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