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SMTL ID : 8ww2.1

GPR3/Gs complex

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-mer

Ligands

1 x OLA: OLEIC ACID(Non-covalent)

OLA.1:

10 residues within 4Å:

Chain E: L.47, H.96, L.116, F.120, T.121, I.124, L.198, A.201, F.202
Ligands: PLM.3

9 PLIP interactions:

9 interactions with chain E

Hydrophobic interactions: E:L.116, E:F.120, E:T.121, E:I.124, E:L.198, E:A.201
Water bridges: E:H.96, E:Y.280
Salt bridges: E:H.96

1 x Y01: CHOLESTEROL HEMISUCCINATE(Non-covalent)

Y01.2:

7 residues within 4Å:

Chain E: V.132, Y.135, L.136, Y.139, V.205, I.208
Ligands: PLM.3

5 PLIP interactions:

5 interactions with chain E

Hydrophobic interactions: E:V.132, E:V.132, E:Y.135, E:V.205, E:I.208

1 x PLM: PALMITIC ACID(Non-covalent)

PLM.3:

7 residues within 4Å:

Chain E: T.121, G.125, L.128, R.152, V.160
Ligands: OLA.1, Y01.2

4 PLIP interactions:

4 interactions with chain E

Hydrophobic interactions: E:T.121, E:L.128, E:V.160
Salt bridges: E:R.152

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Xiong, Y. et al., Identification of oleic acid as an endogenous ligand of GPR3. Cell Res. (2024)

Release Date

2024-02-14

Peptides

Guanine nucleotide-binding protein G(s) subunit alpha isoforms short: A
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1: B
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2: C
Nb35: D
G-protein coupled receptor 3: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
G

D
N

E
R

Membrane

We predict this structure to be a membrane protein.
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Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Guanine nucleotide-binding protein G(s) subunit alpha isoforms short

Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2

Nb35

G-protein coupled receptor 3

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Cartoon
Tube
Trace
Lines
Ball+Stick
Licorice
Hyperball
Rope
Surface
Spacefill
Outline
Fog

Background

Transparent

Resolution

Low
Medium
High
Extreme

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