SMTL ID : 8zr5.1

Cryo-EM Structure of GPR119-Gs-Firuglipel complex

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-mer

Ligands

1 x 01: 4-[5-[(1~{R})-1-(4-cyclopropylcarbonylphenoxy)propyl]-1,2,4-oxadiazol-3-yl]-2-fluoranyl-~{N}-[(2~{R})-1-oxidanylpropan-2-yl]benzamide

01.1: 23 residues within 4Å: Chain E: F.23, L.77, V.101, T.102, A.105, A.106, V.109, L.110, I.152, C.171, S.172, F.173, V.182, L.185, G.189, F.190, W.254, F.257, L.258, E.277, R.278, Y.279, W.281 10 PLIP interactions: 10 interactions with chain E Hydrophobic interactions: E:V.109, E:L.110, E:L.185, E:F.257, E:W.281, E:W.281 Hydrogen bonds: E:F.173, E:R.278, E:W.281 pi-Stacking: E:W.281

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wong, T.S. et al., Cryo-EM structure of GPR119-Gs complex. To Be Published

Release Date

2024-06-19

Peptides

Guanine nucleotide-binding protein G(s) subunit alpha isoforms short: A
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1: B
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2: C
Nanobody 35: D
Glucose-dependent insulinotropic receptor: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
G

D
N

E
C

Membrane

We predict this structure to be a membrane protein.
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Guanine nucleotide-binding protein G(s) subunit alpha isoforms short

Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2

Nanobody 35

Glucose-dependent insulinotropic receptor

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