SMTL ID : 9erx.1

Structural basis of D9-THC analog activity at the Cannabinoid 1 receptor

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-mer

Ligands

1 x 01: (6aR,10aR)-9-(hydroxymethyl)-6,6-dimethyl-3-(2-methyloctan-2-yl)-6a,7,10,10a-tetrahydrobenzo[c]chromen-1-ol

01.1: 20 residues within 4Å: Chain D: F.133, F.195, S.198, F.199, F.202, H.203, F.214, L.218, V.221, T.222, F.225, I.292, F.293, Y.300, L.301, W.304, L.384, F.404, S.408, C.411 16 PLIP interactions: 16 interactions with chain D Hydrophobic interactions: D:F.195, D:F.199, D:F.199, D:F.202, D:F.214, D:F.225, D:F.293, D:Y.300, D:Y.300, D:L.301, D:W.304, D:W.304, D:L.384 Hydrogen bonds: D:S.408 pi-Stacking: D:F.195, D:F.293

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gloriam, D. et al., Structural basis of Delta 9 -THC analog activity at the Cannabinoid 1 receptor. Res Sq (2024)

Release Date

2024-06-26

Peptides

Guanine nucleotide-binding protein G(i) subunit alpha-1: A
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1: B
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2: C
Cannabinoid receptor 1: D
Antibody ScFv16 Fab fragment: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
R

E
F

Membrane

We predict this structure to be a membrane protein.
Show / Hide

Guanine nucleotide-binding protein G(i) subunit alpha-1

Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2

Cannabinoid receptor 1

Antibody ScFv16 Fab fragment

Related Entries With Identical Sequence