SMTL ID : 1ppc.1

GEOMETRY OF BINDING OF THE BENZAMIDINE-AND ARGININE-BASED INHIBITORS N-ALPHA-(2-NAPHTHYL-SULPHONYL-GLYCYL)-DL-P-AMIDINOPHENYLALANYL-PIPERIDINE (NAPAP) AND (2R,4R)-4-METHYL-1-[N-ALPHA-(3-METHYL-1,2,3,4-TETRAHYDRO-8-QUINOLINESULPHONYL)-L-ARGINYL]-2-PIPERIDINE CARBOXYLIC ACID (MQPA) TO HUMAN ALPHA-THROMBIN: X-RAY CRYSTALLOGRAPHIC DETERMINATION OF THE NAPAP-TRYPSIN COMPLEX AND MODELING OF NAPAP-THROMBIN AND MQPA-THROMBIN

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.80 Å
Oligo State
monomer
Ligands
1 x MID: 1-[N-(NAPHTHALEN-2-YLSULFONYL)GLYCYL-4-CARBAMIMIDOYL-D-PHENYLALANYL]PIPERIDINE(Non-covalent)
1 x CA: CALCIUM ION(Non-covalent)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Bode, W. et al., Geometry of binding of the benzamidine- and arginine-based inhibitors N alpha-(2-naphthyl-sulphonyl-glycyl)-DL-p-amidinophenylalanyl-pipe ridine (NAPAP) and (2R,4R)-4-methyl-1-[N alpha-(3-methyl-1,2,3,4-tetrahydr quinolinesulphonyl)-L-arginyl]-2-piperidine carboxylic acid (MQPA) to human alpha-thrombin.X-ray crystallographic determination of the NAPAP-trypsin complex and modeling of NAPAP-thrombin and MQPA-thrombin. Eur.J.Biochem. (1990)
Peptides
TRYPSIN: A
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
E

TRYPSIN

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1aq7.1 | 1auj.1 | 1az8.1 | 1bju.1 | 1bjv.1 | 1c1n.1 | 1c1o.1 | 1c1p.1 | 1c1q.1 | 1c1r.1 | 1c1s.1 | 1c1t.1 | 1c2d.1 | 1c2e.1 | 1c2f.1 | 1c2g.1 | 1c2h.1 | 1c2i.1 | 1c2j.1 | 1c2k.1 | 1c2l.1 | 1c2m.1 | 1c5p.1 | 1c5q.1 | 1c5r.1 | 1c5s.1 | 1c5t.1 | 1c5u.1 | 1c5v.1 | 1c9t.1  more...