SMTL ID : 5lgo.1

Trypsin inhibitors for the treatment of pancreatitis - cpd 15

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.12 Å

Oligo State

monomer

Ligands

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.1: 6 residues within 4Å: Chain A: Y.5, C.7, T.11, V.12, L.117, C.137 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Y.5

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 6 residues within 4Å: Chain A: E.52, D.53, N.54, V.57, E.59, E.62 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:E.52, A:N.54, A:V.57, A:E.62

1 x 6VZ: (2~{S},4~{S})-1-[4-(aminomethyl)-3-methoxy-phenyl]carbonyl-4-[4-(2-cyclopropylethoxy)-6,8-dihydro-5~{H}-pyrido[3,4-d]pyrimidin-7-yl]-~{N}-methyl-pyrrolidine-2-carboxamide(Non-covalent)

6VZ.3: 20 residues within 4Å: Chain A: H.40, S.78, N.79, T.80, L.81, Q.155, D.171, S.172, C.173, Q.174, G.175, D.176, S.177, V.191, S.192, W.193, G.194, G.196, C.197, G.204 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:L.81, A:L.81, A:V.191, A:W.193, A:W.193, A:W.193 Hydrogen bonds: A:Q.174, A:G.175, A:D.176, A:S.177, A:G.196 Water bridges: A:F.24, A:F.24, A:S.177, A:S.195

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Brandl, T. et al., Trypsin inhibitors for the treatment of pancreatitis. Bioorg.Med.Chem.Lett. (2016)

Release Date

2016-08-10

Peptides

Cationic trypsin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cationic trypsin

Related Entries With Identical Sequence