SMTL ID : 7wba.1

Crystal structure of Bovine Pancreatic Trypsin in complex with Tryptamine at Room Temperature

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.45 Å

Oligo State

monomer

Ligands

1 x TSS: 2-(1H-INDOL-3-YL)ETHANAMINE(Non-covalent)

TSS.1: 11 residues within 4Å: Chain A: D.171, S.172, C.173, Q.174, S.177, S.192, W.193, G.194, G.196, C.197, G.204 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:Q.174, A:Q.174 Hydrogen bonds: A:D.171, A:S.177 Water bridges: A:G.175, A:V.205

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.2: 6 residues within 4Å: Chain A: R.49, I.55, N.56, V.57, V.58, F.64 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.49

1 x CA: CALCIUM ION(Non-covalent)

CA.3: 4 residues within 4Å: Chain A: E.52, N.54, V.57, E.62 6 PLIP interactions: 4 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.52, A:N.54, A:V.57, A:E.62, H2O.1, H2O.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Okumura, H. et al., In situ crystal data-collection and ligand-screening system at SPring-8. Acta Crystallogr.,Sect.F (2022)

Release Date

2022-06-15

Peptides

Cationic trypsin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cationic trypsin

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