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SMTL ID : 2qr9.1

Crystal Structure of the Estrogen Receptor Alpha Ligand Binding Domain Complexed with an Oxabicyclic Derivative Compound

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-2-2-mer

Ligands

2 x HZ3: dimethyl (1R,4S)-5,6-bis(4-hydroxyphenyl)-7-oxabicyclo[2.2.1]hepta-2,5-diene-2,3-dicarboxylate(Non-covalent)

HZ3.1:	18 residues within 4Å: Chain A: M.47, T.51, A.54, E.57, L.88, L.91, M.92, L.95, R.98, F.108, V.122, M.125, I.128, F.129, L.132, H.228, L.229, L.244 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:T.51, A:A.54, A:L.88, A:L.91, A:I.128 Hydrogen bonds: A:E.57, A:R.98 Water bridges: A:R.98 Salt bridges: A:H.228 pi-Stacking: A:F.108
HZ3.2:	18 residues within 4Å: Chain B: M.47, L.50, T.51, A.54, E.57, L.91, M.92, L.95, R.98, L.106, F.108, M.125, I.128, F.129, L.132, H.228, L.229, L.244 11 PLIP interactions: 11 interactions with chain B Hydrophobic interactions: B:L.50, B:T.51, B:A.54, B:L.91, B:L.95, B:I.128 Hydrogen bonds: B:E.57, B:R.98 Water bridges: B:R.98 Salt bridges: B:H.228 pi-Stacking: B:F.108

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Nettles, K.W. et al., NFkappaB selectivity of estrogen receptor ligands revealed by comparative crystallographic analyses. Nat.Chem.Biol. (2008)

Release Date

2008-03-18

Peptides

Estrogen receptor: AB
Nuclear receptor coactivator 2: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Estrogen receptor

Nuclear receptor coactivator 2

Related Entries With Identical Sequence

1l2i.1 | 1l2i.2 | 1mv9.1 | 1mvc.1 | 1mzn.1 | 1mzn.2 | 1t65.1 | 1x7e.1 | 1x7r.1 | 1zky.1 | 2b1v.1 | 2b1z.1 | 2b23.1 | 2fai.1 | 2g44.1 | 2g5o.1 | 2p15.1 | 2p1t.1 | 2p1u.1 | 2p1v.1 | 2q6j.1 | 2qa6.1 | 2qa8.1 | 2qab.1 | 2qgt.1 | 2qgw.1 | 2qh6.1 | 2qse.1 | 2qxm.1 | 2qzo.1 more...less...

2zxz.1 | 2zy0.1 | 3a9e.1 | 3a9e.2 | 3e94.1 | 3erd.1 | 3hlv.1 | 3hm1.1 | 3kwy.1 | 3l03.1 | 3o1d.1 | 3o1e.1 | 3q95.1 | 3q95.2 | 4fhh.1 | 4fhi.1 | 4ia1.1 | 4ia2.1 | 4ia3.1 | 4ia7.1 | 4k4j.1 | 4k6i.1 | 4nqa.1 | 4nqa.2 | 4oc7.1 | 4poh.1 | 4poj.1 | 4pp3.1 | 4pp5.1 | 4pxm.1 | 4q13.1 | 4rfw.1 | 4rmc.1 | 4rmd.1 | 4rme.1 | 4ruo.1 | 4zn7.1 | 4zn9.1 | 4znh.1 | 4zns.1 | 4znt.1 | 4znu.1 | 4znv.1 | 4znw.1 | 4zsh.1 | 5kce.1 | 5lga.1 | 5lyq.1 | 5mj5.1 | 5t1z.1 | 5tld.1 | 5tlf.1 | 5tlg.1 | 5tll.1 | 5tlm.1 | 5tlo.1 | 5tlp.1 | 5tlt.1 | 5tlu.1 | 5tlv.1 | 5tlx.1 | 5tly.1 | 5tm1.1 | 5tm2.1 | 5tm3.1 | 5tm4.1 | 5tm5.1 | 5tm6.1 | 5tm7.1 | 5tm8.1 | 5tm9.1 | 5tml.1 | 5tmm.1 | 5tmo.1 | 5tmq.1 | 5tmr.1 | 5tms.1 | 5tmt.1 | 5tmu.1 | 5tmv.1 | 5tmw.1 | 5tmz.1 | 5tn1.1 | 5tn3.1 | 5tn4.1 | 5tn5.1 | 5tn6.1 | 5tn7.1 | 5tn8.1 | 5u2d.1 | 6czn.1 | 6lb4.1 | 6lb5.1 | 6lb6.1 | 6sti.1 | 7jhd.1 | 7nke.1 | 7pdq.1 | 7pdt.1 | 7t2x.1 | 7t2x.2 | 7uw2.1 | 7uw4.1 | 7w3p.1 | 7w3q.1 | 8ev1.1 | 8ev1.2 | 8ev2.1 | 8ev2.2 | 8p9x.1 | 8pwd.1 | 8pwe.1 | 8pwf.1 | 8pwm.1 | 8pz6.1 | 8pz7.1 | 8pz8.1 | 8pz9.1 | 8pzb.1 | 9ez1.1 | 9ez2.1

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