SMTL ID : 4znu.1

Crystal Structure of the ER-alpha Ligand-binding Domain (Y537S) in complex with a 2-Methyl-substituted OBHS derivative

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

hetero-2-2-mer

Ligands

2 x 4Q9: 2-methylphenyl (1S,2R,4S)-5,6-bis(4-hydroxyphenyl)-7-oxabicyclo[2.2.1]hept-5-ene-2-sulfonate(Non-covalent)

4Q9.1: 19 residues within 4Å: Chain A: M.43, L.46, T.47, A.50, E.53, L.87, M.88, L.91, R.94, F.104, V.118, E.119, G.120, M.121, I.124, G.221, H.224, L.225, L.240 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:L.46, A:A.50, A:L.87, A:L.91, A:L.91, A:F.104, A:V.118, A:M.121, A:I.124, A:H.224, A:L.225 Hydrogen bonds: A:E.53, A:R.94, A:R.94 pi-Stacking: A:F.104 4Q9.2: 20 residues within 4Å: Chain C: M.43, L.46, T.47, A.50, E.53, L.87, M.88, L.91, R.94, F.104, V.118, E.119, G.120, M.121, I.124, G.221, H.224, L.225, L.236, L.240 15 PLIP interactions: 15 interactions with chain C Hydrophobic interactions: C:L.46, C:A.50, C:L.87, C:L.91, C:L.91, C:F.104, C:V.118, C:M.121, C:I.124, C:H.224, C:L.225 Hydrogen bonds: C:E.53, C:R.94 Water bridges: C:R.94 pi-Stacking: C:F.104

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nwachukwu, J.C. et al., Predictive features of ligand-specific signaling through the estrogen receptor. Mol.Syst.Biol. (2016)

Release Date

2016-05-04

Peptides

Estrogen receptor: AC
Nuclear receptor-interacting peptide: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
B

B
C

D
D

Estrogen receptor

Nuclear receptor-interacting peptide

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