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SMTL ID : 2qzo.1

Crystal Structure of the Estrogen Receptor Alpha Ligand Binding Domain Complexed with WAY-169916

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.72 Å

Oligo State

hetero-2-2-mer

Ligands

2 x KN1: 4-[1-allyl-7-(trifluoromethyl)-1H-indazol-3-yl]benzene-1,3-diol(Non-covalent)

KN1.1:	16 residues within 4Å: Chain A: M.47, L.50, T.51, L.53, E.57, L.91, M.92, L.95, R.98, F.108, M.125, I.128, F.129, L.132, G.225, H.228 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:T.51, A:L.53, A:L.91, A:L.95, A:I.128, A:F.129, A:L.132 Hydrogen bonds: A:E.57, A:R.98 Water bridges: A:L.95 pi-Stacking: A:F.108
KN1.2:	14 residues within 4Å: Chain B: L.50, L.53, E.57, L.91, M.92, L.95, R.98, F.108, M.125, I.128, L.132, G.225, H.228, L.229 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:L.53, B:L.91, B:F.108, B:L.132 Hydrogen bonds: B:E.57, B:R.98 Water bridges: B:R.98 pi-Stacking: B:F.108

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Bruning, J.B. et al., Coupling of receptor conformation and ligand orientation determine graded activity. Nat.Chem.Biol. (2010)

Release Date

2008-08-26

Peptides

Estrogen receptor: AB
Nuclear receptor coactivator 2: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Estrogen receptor

Nuclear receptor coactivator 2

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